Cargando…

Poxvirus Bioinformatics Resource Center: a comprehensive Poxviridae informational and analytical resource

The Poxvirus Bioinformatics Resource Center (PBRC) has been established to provide informational and analytical resources to the scientific community to aid research directed at providing a better understanding of the Poxviridae family of viruses. The PBRC was specifically established as the result...

Descripción completa

Detalles Bibliográficos
Autores principales: Lefkowitz, Elliot J., Upton, Chris, Changayil, Shankar S., Buck, Charles, Traktman, Paula, Buller, R. Mark L.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2005
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC540064/
https://www.ncbi.nlm.nih.gov/pubmed/15608205
http://dx.doi.org/10.1093/nar/gki110
_version_ 1782122115656318976
author Lefkowitz, Elliot J.
Upton, Chris
Changayil, Shankar S.
Buck, Charles
Traktman, Paula
Buller, R. Mark L.
author_facet Lefkowitz, Elliot J.
Upton, Chris
Changayil, Shankar S.
Buck, Charles
Traktman, Paula
Buller, R. Mark L.
author_sort Lefkowitz, Elliot J.
collection PubMed
description The Poxvirus Bioinformatics Resource Center (PBRC) has been established to provide informational and analytical resources to the scientific community to aid research directed at providing a better understanding of the Poxviridae family of viruses. The PBRC was specifically established as the result of the concern that variola virus, the causative agent of smallpox, as well as related viruses, might be utilized as biological weapons. In addition, the PBRC supports research on poxviruses that might be considered new and emerging infectious agents such as monkeypox virus. The PBRC consists of a relational database and web application that supports the data storage, annotation, analysis and information exchange goals of the project. The current release consists of over 35 complete genomic sequences of various genera, species and strains of viruses from the Poxviridae family. Sequence and annotation information for these viruses has been obtained from sequences publicly available from GenBank as well as sequences not yet deposited in GenBank that have been obtained from ongoing sequencing projects. In addition to sequence data, the PBRC provides comprehensive annotation and curation of virus genes; analytical tools to aid in the understanding of the available sequence data, including tools for the comparative analysis of different virus isolates; and visualization tools to help better display the results of various analyses. The PBRC represents the initial development of what will become a more comprehensive Viral Bioinformatics Resource Center for Biodefense that will be one of the National Institute of Allergy and Infectious Diseases' ‘Bioinformatics Resource Centers for Biodefense and Emerging or Re-Emerging Infectious Diseases’. The PBRC website is available at http://www.poxvirus.org.
format Text
id pubmed-540064
institution National Center for Biotechnology Information
language English
publishDate 2005
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-5400642005-01-04 Poxvirus Bioinformatics Resource Center: a comprehensive Poxviridae informational and analytical resource Lefkowitz, Elliot J. Upton, Chris Changayil, Shankar S. Buck, Charles Traktman, Paula Buller, R. Mark L. Nucleic Acids Res Articles The Poxvirus Bioinformatics Resource Center (PBRC) has been established to provide informational and analytical resources to the scientific community to aid research directed at providing a better understanding of the Poxviridae family of viruses. The PBRC was specifically established as the result of the concern that variola virus, the causative agent of smallpox, as well as related viruses, might be utilized as biological weapons. In addition, the PBRC supports research on poxviruses that might be considered new and emerging infectious agents such as monkeypox virus. The PBRC consists of a relational database and web application that supports the data storage, annotation, analysis and information exchange goals of the project. The current release consists of over 35 complete genomic sequences of various genera, species and strains of viruses from the Poxviridae family. Sequence and annotation information for these viruses has been obtained from sequences publicly available from GenBank as well as sequences not yet deposited in GenBank that have been obtained from ongoing sequencing projects. In addition to sequence data, the PBRC provides comprehensive annotation and curation of virus genes; analytical tools to aid in the understanding of the available sequence data, including tools for the comparative analysis of different virus isolates; and visualization tools to help better display the results of various analyses. The PBRC represents the initial development of what will become a more comprehensive Viral Bioinformatics Resource Center for Biodefense that will be one of the National Institute of Allergy and Infectious Diseases' ‘Bioinformatics Resource Centers for Biodefense and Emerging or Re-Emerging Infectious Diseases’. The PBRC website is available at http://www.poxvirus.org. Oxford University Press 2005-01-01 2004-12-17 /pmc/articles/PMC540064/ /pubmed/15608205 http://dx.doi.org/10.1093/nar/gki110 Text en Copyright © 2005 Oxford University Press
spellingShingle Articles
Lefkowitz, Elliot J.
Upton, Chris
Changayil, Shankar S.
Buck, Charles
Traktman, Paula
Buller, R. Mark L.
Poxvirus Bioinformatics Resource Center: a comprehensive Poxviridae informational and analytical resource
title Poxvirus Bioinformatics Resource Center: a comprehensive Poxviridae informational and analytical resource
title_full Poxvirus Bioinformatics Resource Center: a comprehensive Poxviridae informational and analytical resource
title_fullStr Poxvirus Bioinformatics Resource Center: a comprehensive Poxviridae informational and analytical resource
title_full_unstemmed Poxvirus Bioinformatics Resource Center: a comprehensive Poxviridae informational and analytical resource
title_short Poxvirus Bioinformatics Resource Center: a comprehensive Poxviridae informational and analytical resource
title_sort poxvirus bioinformatics resource center: a comprehensive poxviridae informational and analytical resource
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC540064/
https://www.ncbi.nlm.nih.gov/pubmed/15608205
http://dx.doi.org/10.1093/nar/gki110
work_keys_str_mv AT lefkowitzelliotj poxvirusbioinformaticsresourcecenteracomprehensivepoxviridaeinformationalandanalyticalresource
AT uptonchris poxvirusbioinformaticsresourcecenteracomprehensivepoxviridaeinformationalandanalyticalresource
AT changayilshankars poxvirusbioinformaticsresourcecenteracomprehensivepoxviridaeinformationalandanalyticalresource
AT buckcharles poxvirusbioinformaticsresourcecenteracomprehensivepoxviridaeinformationalandanalyticalresource
AT traktmanpaula poxvirusbioinformaticsresourcecenteracomprehensivepoxviridaeinformationalandanalyticalresource
AT bullerrmarkl poxvirusbioinformaticsresourcecenteracomprehensivepoxviridaeinformationalandanalyticalresource