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Se-SAD serial femtosecond crystallography datasets from selenobiotinyl-streptavidin
We provide a detailed description of selenobiotinyl-streptavidin (Se-B SA) co-crystal datasets recorded using the Coherent X-ray Imaging (CXI) instrument at the Linac Coherent Light Source (LCLS) for selenium single-wavelength anomalous diffraction (Se-SAD) structure determination. Se-B SA was chose...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5404608/ https://www.ncbi.nlm.nih.gov/pubmed/28440794 http://dx.doi.org/10.1038/sdata.2017.55 |
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author | Yoon, Chun Hong DeMirci, Hasan Sierra, Raymond G. Dao, E. Han Ahmadi, Radman Aksit, Fulya Aquila, Andrew L. Batyuk, Alexander Ciftci, Halilibrahim Guillet, Serge Hayes, Matt J. Hayes, Brandon Lane, Thomas J. Liang, Meng Lundström, Ulf Koglin, Jason E. Mgbam, Paul Rao, Yashas Rendahl, Theodore Rodriguez, Evan Zhang, Lindsey Wakatsuki, Soichi Boutet, Sébastien Holton, James M. Hunter, Mark S. |
author_facet | Yoon, Chun Hong DeMirci, Hasan Sierra, Raymond G. Dao, E. Han Ahmadi, Radman Aksit, Fulya Aquila, Andrew L. Batyuk, Alexander Ciftci, Halilibrahim Guillet, Serge Hayes, Matt J. Hayes, Brandon Lane, Thomas J. Liang, Meng Lundström, Ulf Koglin, Jason E. Mgbam, Paul Rao, Yashas Rendahl, Theodore Rodriguez, Evan Zhang, Lindsey Wakatsuki, Soichi Boutet, Sébastien Holton, James M. Hunter, Mark S. |
author_sort | Yoon, Chun Hong |
collection | PubMed |
description | We provide a detailed description of selenobiotinyl-streptavidin (Se-B SA) co-crystal datasets recorded using the Coherent X-ray Imaging (CXI) instrument at the Linac Coherent Light Source (LCLS) for selenium single-wavelength anomalous diffraction (Se-SAD) structure determination. Se-B SA was chosen as the model system for its high affinity between biotin and streptavidin where the sulfur atom in the biotin molecule (C(10)H(16)N(2)O(3)S) is substituted with selenium. The dataset was collected at three different transmissions (100, 50, and 10%) using a serial sample chamber setup which allows for two sample chambers, a front chamber and a back chamber, to operate simultaneously. Diffraction patterns from Se-B SA were recorded to a resolution of 1.9 Å. The dataset is publicly available through the Coherent X-ray Imaging Data Bank (CXIDB) and also on LCLS compute nodes as a resource for research and algorithm development. |
format | Online Article Text |
id | pubmed-5404608 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-54046082017-05-01 Se-SAD serial femtosecond crystallography datasets from selenobiotinyl-streptavidin Yoon, Chun Hong DeMirci, Hasan Sierra, Raymond G. Dao, E. Han Ahmadi, Radman Aksit, Fulya Aquila, Andrew L. Batyuk, Alexander Ciftci, Halilibrahim Guillet, Serge Hayes, Matt J. Hayes, Brandon Lane, Thomas J. Liang, Meng Lundström, Ulf Koglin, Jason E. Mgbam, Paul Rao, Yashas Rendahl, Theodore Rodriguez, Evan Zhang, Lindsey Wakatsuki, Soichi Boutet, Sébastien Holton, James M. Hunter, Mark S. Sci Data Data Descriptor We provide a detailed description of selenobiotinyl-streptavidin (Se-B SA) co-crystal datasets recorded using the Coherent X-ray Imaging (CXI) instrument at the Linac Coherent Light Source (LCLS) for selenium single-wavelength anomalous diffraction (Se-SAD) structure determination. Se-B SA was chosen as the model system for its high affinity between biotin and streptavidin where the sulfur atom in the biotin molecule (C(10)H(16)N(2)O(3)S) is substituted with selenium. The dataset was collected at three different transmissions (100, 50, and 10%) using a serial sample chamber setup which allows for two sample chambers, a front chamber and a back chamber, to operate simultaneously. Diffraction patterns from Se-B SA were recorded to a resolution of 1.9 Å. The dataset is publicly available through the Coherent X-ray Imaging Data Bank (CXIDB) and also on LCLS compute nodes as a resource for research and algorithm development. Nature Publishing Group 2017-04-25 /pmc/articles/PMC5404608/ /pubmed/28440794 http://dx.doi.org/10.1038/sdata.2017.55 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0 This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0 Metadata associated with this Data Descriptor is available at http://www.nature.com/sdata/ and is released under the CC0 waiver to maximize reuse. |
spellingShingle | Data Descriptor Yoon, Chun Hong DeMirci, Hasan Sierra, Raymond G. Dao, E. Han Ahmadi, Radman Aksit, Fulya Aquila, Andrew L. Batyuk, Alexander Ciftci, Halilibrahim Guillet, Serge Hayes, Matt J. Hayes, Brandon Lane, Thomas J. Liang, Meng Lundström, Ulf Koglin, Jason E. Mgbam, Paul Rao, Yashas Rendahl, Theodore Rodriguez, Evan Zhang, Lindsey Wakatsuki, Soichi Boutet, Sébastien Holton, James M. Hunter, Mark S. Se-SAD serial femtosecond crystallography datasets from selenobiotinyl-streptavidin |
title | Se-SAD serial femtosecond crystallography datasets from selenobiotinyl-streptavidin |
title_full | Se-SAD serial femtosecond crystallography datasets from selenobiotinyl-streptavidin |
title_fullStr | Se-SAD serial femtosecond crystallography datasets from selenobiotinyl-streptavidin |
title_full_unstemmed | Se-SAD serial femtosecond crystallography datasets from selenobiotinyl-streptavidin |
title_short | Se-SAD serial femtosecond crystallography datasets from selenobiotinyl-streptavidin |
title_sort | se-sad serial femtosecond crystallography datasets from selenobiotinyl-streptavidin |
topic | Data Descriptor |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5404608/ https://www.ncbi.nlm.nih.gov/pubmed/28440794 http://dx.doi.org/10.1038/sdata.2017.55 |
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