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Association Between Secretoglobin Family 3A Member 2 (SCGB3A2) Gene Polymorphisms and Asthma in a Korean Population
BACKGROUND: Secretoglobin family 3A member 2 (SCGB3A2) plays an important role in secreting lung surfactant protein, which is a downstream target of thyroid transcription factor. MATERIAL/METHODS: We investigated whether single-nucleotide polymorphisms (SNPs) of SCGB3A2 gene contribute to susceptibi...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Scientific Literature, Inc.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5405786/ https://www.ncbi.nlm.nih.gov/pubmed/28422086 http://dx.doi.org/10.12659/MSM.903983 |
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author | Kim, Su Kang Seok, Hosik Park, Hae Jeong Han, Kyuup Kang, Sang Wook Ban, Ju Yeon Jung, Hee-Jae Kim, Kwan-Il Lee, Beom-Joon Kim, Jinju Chung, Joo-Ho |
author_facet | Kim, Su Kang Seok, Hosik Park, Hae Jeong Han, Kyuup Kang, Sang Wook Ban, Ju Yeon Jung, Hee-Jae Kim, Kwan-Il Lee, Beom-Joon Kim, Jinju Chung, Joo-Ho |
author_sort | Kim, Su Kang |
collection | PubMed |
description | BACKGROUND: Secretoglobin family 3A member 2 (SCGB3A2) plays an important role in secreting lung surfactant protein, which is a downstream target of thyroid transcription factor. MATERIAL/METHODS: We investigated whether single-nucleotide polymorphisms (SNPs) of SCGB3A2 gene contribute to susceptibility to asthma. To explore this possible association, 2 promoter SNPs (rs6882292, 659 G/A and rs1368408, −112 G/A) and missense SNP (rs151333009, stop codon) were tested in SCGB3A2 gene in 101 asthma patients and 377 healthy control subjects. SNPStats was used to obtain odds ratio (OR), 95% confidence intervals (CI), and P value adjusted for age and sex as covariables. Logistic regression method in each model (dominant, recessive, and log-additive) was applied to analyze genetic data. RESULTS: rs151333009 SNP showed a monomorphic genotype. Two promoter SNPs (rs6882292, −659 G/A and rs1368408, −112 G/A) showed significant association with asthma (rs6882292, OR=2.66, 95% CI=1.42–5.01, p=0.0033 in dominant model, OR=2.45, 95% CI=1.33–4.54, p=0.0055 in log-additive model; rs1368408, OR=1.59, 95% CI=1.02–2.49, p=0.041 in dominant model, OR=3.02, 95% CI=1.15–7.90, p=0.03 in recessive model, OR=1.63, 95% CI=1.63, 95% CI=1.12–2.37, p=0.012 in log-additive model). CONCLUSIONS: These results suggest that the promoter SNPs (rs6882292 and rs1368408) of SCGB3A2 gene may contribute to susceptibility to asthma in a Korean population. |
format | Online Article Text |
id | pubmed-5405786 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | International Scientific Literature, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-54057862017-05-04 Association Between Secretoglobin Family 3A Member 2 (SCGB3A2) Gene Polymorphisms and Asthma in a Korean Population Kim, Su Kang Seok, Hosik Park, Hae Jeong Han, Kyuup Kang, Sang Wook Ban, Ju Yeon Jung, Hee-Jae Kim, Kwan-Il Lee, Beom-Joon Kim, Jinju Chung, Joo-Ho Med Sci Monit Molecular Biology BACKGROUND: Secretoglobin family 3A member 2 (SCGB3A2) plays an important role in secreting lung surfactant protein, which is a downstream target of thyroid transcription factor. MATERIAL/METHODS: We investigated whether single-nucleotide polymorphisms (SNPs) of SCGB3A2 gene contribute to susceptibility to asthma. To explore this possible association, 2 promoter SNPs (rs6882292, 659 G/A and rs1368408, −112 G/A) and missense SNP (rs151333009, stop codon) were tested in SCGB3A2 gene in 101 asthma patients and 377 healthy control subjects. SNPStats was used to obtain odds ratio (OR), 95% confidence intervals (CI), and P value adjusted for age and sex as covariables. Logistic regression method in each model (dominant, recessive, and log-additive) was applied to analyze genetic data. RESULTS: rs151333009 SNP showed a monomorphic genotype. Two promoter SNPs (rs6882292, −659 G/A and rs1368408, −112 G/A) showed significant association with asthma (rs6882292, OR=2.66, 95% CI=1.42–5.01, p=0.0033 in dominant model, OR=2.45, 95% CI=1.33–4.54, p=0.0055 in log-additive model; rs1368408, OR=1.59, 95% CI=1.02–2.49, p=0.041 in dominant model, OR=3.02, 95% CI=1.15–7.90, p=0.03 in recessive model, OR=1.63, 95% CI=1.63, 95% CI=1.12–2.37, p=0.012 in log-additive model). CONCLUSIONS: These results suggest that the promoter SNPs (rs6882292 and rs1368408) of SCGB3A2 gene may contribute to susceptibility to asthma in a Korean population. International Scientific Literature, Inc. 2017-04-19 /pmc/articles/PMC5405786/ /pubmed/28422086 http://dx.doi.org/10.12659/MSM.903983 Text en © Med Sci Monit, 2017 This work is licensed under Creative Common Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) ) |
spellingShingle | Molecular Biology Kim, Su Kang Seok, Hosik Park, Hae Jeong Han, Kyuup Kang, Sang Wook Ban, Ju Yeon Jung, Hee-Jae Kim, Kwan-Il Lee, Beom-Joon Kim, Jinju Chung, Joo-Ho Association Between Secretoglobin Family 3A Member 2 (SCGB3A2) Gene Polymorphisms and Asthma in a Korean Population |
title | Association Between Secretoglobin Family 3A Member 2 (SCGB3A2) Gene Polymorphisms and Asthma in a Korean Population |
title_full | Association Between Secretoglobin Family 3A Member 2 (SCGB3A2) Gene Polymorphisms and Asthma in a Korean Population |
title_fullStr | Association Between Secretoglobin Family 3A Member 2 (SCGB3A2) Gene Polymorphisms and Asthma in a Korean Population |
title_full_unstemmed | Association Between Secretoglobin Family 3A Member 2 (SCGB3A2) Gene Polymorphisms and Asthma in a Korean Population |
title_short | Association Between Secretoglobin Family 3A Member 2 (SCGB3A2) Gene Polymorphisms and Asthma in a Korean Population |
title_sort | association between secretoglobin family 3a member 2 (scgb3a2) gene polymorphisms and asthma in a korean population |
topic | Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5405786/ https://www.ncbi.nlm.nih.gov/pubmed/28422086 http://dx.doi.org/10.12659/MSM.903983 |
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