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DNA Barcoding analysis of seafood accuracy in Washington, D.C. restaurants

In Washington D.C., recent legislation authorizes citizens to test if products are properly represented and, if they are not, to bring a lawsuit for the benefit of the general public. Recent studies revealing the widespread phenomenon of seafood substitution across the United States make it a fertil...

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Autores principales: Stern, David B., Castro Nallar, Eduardo, Rathod, Jason, Crandall, Keith A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5407275/
https://www.ncbi.nlm.nih.gov/pubmed/28462038
http://dx.doi.org/10.7717/peerj.3234
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author Stern, David B.
Castro Nallar, Eduardo
Rathod, Jason
Crandall, Keith A.
author_facet Stern, David B.
Castro Nallar, Eduardo
Rathod, Jason
Crandall, Keith A.
author_sort Stern, David B.
collection PubMed
description In Washington D.C., recent legislation authorizes citizens to test if products are properly represented and, if they are not, to bring a lawsuit for the benefit of the general public. Recent studies revealing the widespread phenomenon of seafood substitution across the United States make it a fertile area for consumer protection testing. DNA barcoding provides an accurate and cost-effective way to perform these tests, especially when tissue alone is available making species identification based on morphology impossible. In this study, we sequenced the 5′ barcoding region of the Cytochrome Oxidase I gene for 12 samples of vertebrate and invertebrate food items across six restaurants in Washington, D.C. and used multiple analytical methods to make identifications. These samples included several ambiguous menu listings, sequences with little genetic variation among closely related species and one sequence with no available reference sequence. Despite these challenges, we were able to make identifications for all samples and found that 33% were potentially mislabeled. While we found a high degree of mislabeling, the errors involved closely related species and we did not identify egregious substitutions as have been found in other cities. This study highlights the efficacy of DNA barcoding and robust analyses in identifying seafood items for consumer protection.
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spelling pubmed-54072752017-05-01 DNA Barcoding analysis of seafood accuracy in Washington, D.C. restaurants Stern, David B. Castro Nallar, Eduardo Rathod, Jason Crandall, Keith A. PeerJ Conservation Biology In Washington D.C., recent legislation authorizes citizens to test if products are properly represented and, if they are not, to bring a lawsuit for the benefit of the general public. Recent studies revealing the widespread phenomenon of seafood substitution across the United States make it a fertile area for consumer protection testing. DNA barcoding provides an accurate and cost-effective way to perform these tests, especially when tissue alone is available making species identification based on morphology impossible. In this study, we sequenced the 5′ barcoding region of the Cytochrome Oxidase I gene for 12 samples of vertebrate and invertebrate food items across six restaurants in Washington, D.C. and used multiple analytical methods to make identifications. These samples included several ambiguous menu listings, sequences with little genetic variation among closely related species and one sequence with no available reference sequence. Despite these challenges, we were able to make identifications for all samples and found that 33% were potentially mislabeled. While we found a high degree of mislabeling, the errors involved closely related species and we did not identify egregious substitutions as have been found in other cities. This study highlights the efficacy of DNA barcoding and robust analyses in identifying seafood items for consumer protection. PeerJ Inc. 2017-04-25 /pmc/articles/PMC5407275/ /pubmed/28462038 http://dx.doi.org/10.7717/peerj.3234 Text en ©2017 Stern et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Conservation Biology
Stern, David B.
Castro Nallar, Eduardo
Rathod, Jason
Crandall, Keith A.
DNA Barcoding analysis of seafood accuracy in Washington, D.C. restaurants
title DNA Barcoding analysis of seafood accuracy in Washington, D.C. restaurants
title_full DNA Barcoding analysis of seafood accuracy in Washington, D.C. restaurants
title_fullStr DNA Barcoding analysis of seafood accuracy in Washington, D.C. restaurants
title_full_unstemmed DNA Barcoding analysis of seafood accuracy in Washington, D.C. restaurants
title_short DNA Barcoding analysis of seafood accuracy in Washington, D.C. restaurants
title_sort dna barcoding analysis of seafood accuracy in washington, d.c. restaurants
topic Conservation Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5407275/
https://www.ncbi.nlm.nih.gov/pubmed/28462038
http://dx.doi.org/10.7717/peerj.3234
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