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Engineering genetic circuit interactions within and between synthetic minimal cells

Genetic circuits and reaction cascades are of great importance for synthetic biology, biochemistry, and bioengineering. An open question is how to maximize the modularity of their design to enable the integration of different reaction networks and to optimize their scalability and flexibility. One o...

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Autores principales: Adamala, Katarzyna P., Martin-Alarcon, Daniel A., Guthrie-Honea, Katriona R., Boyden, Edward S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5407321/
https://www.ncbi.nlm.nih.gov/pubmed/28430194
http://dx.doi.org/10.1038/nchem.2644
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author Adamala, Katarzyna P.
Martin-Alarcon, Daniel A.
Guthrie-Honea, Katriona R.
Boyden, Edward S.
author_facet Adamala, Katarzyna P.
Martin-Alarcon, Daniel A.
Guthrie-Honea, Katriona R.
Boyden, Edward S.
author_sort Adamala, Katarzyna P.
collection PubMed
description Genetic circuits and reaction cascades are of great importance for synthetic biology, biochemistry, and bioengineering. An open question is how to maximize the modularity of their design to enable the integration of different reaction networks and to optimize their scalability and flexibility. One option is encapsulation within liposomes which enables chemical reactions to proceed in well-isolated environments. Here we adapt liposome encapsulation to enable the modular, controlled compartmentalization of genetic circuits and cascades. We demonstrate that it is possible to engineer genetic circuit-containing synthetic minimal cells (synells) to contain multiple-part genetic cascades, and that these cascades can be controlled by external signals as well as inter-liposomal communication without cross-talk. We also show that liposomes containing different cascades can be fused in a controlled way so that the products of incompatible reactions can be brought together. Synells thus enable more modular creation of synthetic biology cascades, an essential step towards their ultimate programmability.
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spelling pubmed-54073212017-05-14 Engineering genetic circuit interactions within and between synthetic minimal cells Adamala, Katarzyna P. Martin-Alarcon, Daniel A. Guthrie-Honea, Katriona R. Boyden, Edward S. Nat Chem Article Genetic circuits and reaction cascades are of great importance for synthetic biology, biochemistry, and bioengineering. An open question is how to maximize the modularity of their design to enable the integration of different reaction networks and to optimize their scalability and flexibility. One option is encapsulation within liposomes which enables chemical reactions to proceed in well-isolated environments. Here we adapt liposome encapsulation to enable the modular, controlled compartmentalization of genetic circuits and cascades. We demonstrate that it is possible to engineer genetic circuit-containing synthetic minimal cells (synells) to contain multiple-part genetic cascades, and that these cascades can be controlled by external signals as well as inter-liposomal communication without cross-talk. We also show that liposomes containing different cascades can be fused in a controlled way so that the products of incompatible reactions can be brought together. Synells thus enable more modular creation of synthetic biology cascades, an essential step towards their ultimate programmability. 2016-11-14 2017-05 /pmc/articles/PMC5407321/ /pubmed/28430194 http://dx.doi.org/10.1038/nchem.2644 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use: http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Adamala, Katarzyna P.
Martin-Alarcon, Daniel A.
Guthrie-Honea, Katriona R.
Boyden, Edward S.
Engineering genetic circuit interactions within and between synthetic minimal cells
title Engineering genetic circuit interactions within and between synthetic minimal cells
title_full Engineering genetic circuit interactions within and between synthetic minimal cells
title_fullStr Engineering genetic circuit interactions within and between synthetic minimal cells
title_full_unstemmed Engineering genetic circuit interactions within and between synthetic minimal cells
title_short Engineering genetic circuit interactions within and between synthetic minimal cells
title_sort engineering genetic circuit interactions within and between synthetic minimal cells
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5407321/
https://www.ncbi.nlm.nih.gov/pubmed/28430194
http://dx.doi.org/10.1038/nchem.2644
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