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Mechanisms of LTR-Retroelement Transposition: Lessons from Drosophila melanogaster

Long terminal repeat (LTR) retrotransposons occupy a special place among all mobile genetic element families. The structure of LTR retrotransposons that have three open reading frames is identical to DNA forms of retroviruses that are integrated into the host genome. Several lines of evidence sugges...

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Autores principales: Nefedova, Lidia N., Kim, Alexander I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5408687/
https://www.ncbi.nlm.nih.gov/pubmed/28420154
http://dx.doi.org/10.3390/v9040081
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author Nefedova, Lidia N.
Kim, Alexander I.
author_facet Nefedova, Lidia N.
Kim, Alexander I.
author_sort Nefedova, Lidia N.
collection PubMed
description Long terminal repeat (LTR) retrotransposons occupy a special place among all mobile genetic element families. The structure of LTR retrotransposons that have three open reading frames is identical to DNA forms of retroviruses that are integrated into the host genome. Several lines of evidence suggest that LTR retrotransposons share a common ancestry with retroviruses and thus are highly relevant to understanding mechanisms of transposition. Drosophila melanogaster is an exceptionally convenient model for studying the mechanisms of retrotransposon movement because many such elements in its genome are transpositionally active. Moreover, two LTR-retrotransposons of D. melanogaster, gypsy and ZAM, have been found to have infectious properties and have been classified as errantiviruses. Despite numerous studies focusing on retroviral integration process, there is still no clear understanding of integration specificity in a target site. Most LTR retrotransposons non-specifically integrate into a target site. Site-specificity of integration at vertebrate retroviruses is rather relative. At the same time, sequence-specific integration is the exclusive property of errantiviruses and their derivatives with two open reading frames. The possible basis for the errantivirus integration specificity is discussed in the present review.
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spelling pubmed-54086872017-05-18 Mechanisms of LTR-Retroelement Transposition: Lessons from Drosophila melanogaster Nefedova, Lidia N. Kim, Alexander I. Viruses Review Long terminal repeat (LTR) retrotransposons occupy a special place among all mobile genetic element families. The structure of LTR retrotransposons that have three open reading frames is identical to DNA forms of retroviruses that are integrated into the host genome. Several lines of evidence suggest that LTR retrotransposons share a common ancestry with retroviruses and thus are highly relevant to understanding mechanisms of transposition. Drosophila melanogaster is an exceptionally convenient model for studying the mechanisms of retrotransposon movement because many such elements in its genome are transpositionally active. Moreover, two LTR-retrotransposons of D. melanogaster, gypsy and ZAM, have been found to have infectious properties and have been classified as errantiviruses. Despite numerous studies focusing on retroviral integration process, there is still no clear understanding of integration specificity in a target site. Most LTR retrotransposons non-specifically integrate into a target site. Site-specificity of integration at vertebrate retroviruses is rather relative. At the same time, sequence-specific integration is the exclusive property of errantiviruses and their derivatives with two open reading frames. The possible basis for the errantivirus integration specificity is discussed in the present review. MDPI 2017-04-16 /pmc/articles/PMC5408687/ /pubmed/28420154 http://dx.doi.org/10.3390/v9040081 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Nefedova, Lidia N.
Kim, Alexander I.
Mechanisms of LTR-Retroelement Transposition: Lessons from Drosophila melanogaster
title Mechanisms of LTR-Retroelement Transposition: Lessons from Drosophila melanogaster
title_full Mechanisms of LTR-Retroelement Transposition: Lessons from Drosophila melanogaster
title_fullStr Mechanisms of LTR-Retroelement Transposition: Lessons from Drosophila melanogaster
title_full_unstemmed Mechanisms of LTR-Retroelement Transposition: Lessons from Drosophila melanogaster
title_short Mechanisms of LTR-Retroelement Transposition: Lessons from Drosophila melanogaster
title_sort mechanisms of ltr-retroelement transposition: lessons from drosophila melanogaster
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5408687/
https://www.ncbi.nlm.nih.gov/pubmed/28420154
http://dx.doi.org/10.3390/v9040081
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