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An Additional Method for Analyzing the Reversible Inhibition of an Enzyme Using Acid Phosphatase as a Model
Using wheat germ acid phosphatase and sodium orthovanadate as a competitive inhibitor, a novel method for analyzing reversible inhibition was carried out. Our alternative approach involves plotting the initial velocity at which product is formed as a function of the ratio of substrate concentration...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Bentham Science Publishers
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5411997/ https://www.ncbi.nlm.nih.gov/pubmed/28503118 http://dx.doi.org/10.2174/1573408011666150605223952 |
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author | Baumhardt, Jordan M. Dorsey, Benjamin M. McLauchlan, Craig C. Jones, Marjorie A. |
author_facet | Baumhardt, Jordan M. Dorsey, Benjamin M. McLauchlan, Craig C. Jones, Marjorie A. |
author_sort | Baumhardt, Jordan M. |
collection | PubMed |
description | Using wheat germ acid phosphatase and sodium orthovanadate as a competitive inhibitor, a novel method for analyzing reversible inhibition was carried out. Our alternative approach involves plotting the initial velocity at which product is formed as a function of the ratio of substrate concentration to inhibitor concentration at a constant enzyme concentration and constant assay conditions. The concept of initial concentrations driving equilibrium leads to the chosen axes. Three apparent constants can be derived from this plot: K(max), K(min), and K(inflect). K(max) and K(min) represent the substrate to inhibitor concentration ratio for complete inhibition and minimal inhibition, respectively. K(inflect) represents the substrate to inhibitor concentration ratio at which the enzyme-substrate complex is equal to the inhibitory complex. These constants can be interpolated from the graph or calculated using the first and second derivative of the plot. We conclude that a steeper slope and a shift of the line to the right (increased x-axis values) would indicate a better inhibitor. Since initial velocity is not a linear function of the substrate/inhibitor ratio, this means that inhibition changes more quickly with the change in the [S]/ [I] ratio. When preincubating the enzyme with substrate before the addition of inhibitor, preincubating the enzyme with inhibitor before the addition of substrate or with concurrent addition of both substrate and inhibitor, modest changes in the slopes and y-intercepts were obtained. This plot appears useful for known competitive and non-competitive inhibitors and may have general applicability. |
format | Online Article Text |
id | pubmed-5411997 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Bentham Science Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-54119972017-05-12 An Additional Method for Analyzing the Reversible Inhibition of an
Enzyme Using Acid Phosphatase as a Model Baumhardt, Jordan M. Dorsey, Benjamin M. McLauchlan, Craig C. Jones, Marjorie A. Curr Enzym Inhib Article Using wheat germ acid phosphatase and sodium orthovanadate as a competitive inhibitor, a novel method for analyzing reversible inhibition was carried out. Our alternative approach involves plotting the initial velocity at which product is formed as a function of the ratio of substrate concentration to inhibitor concentration at a constant enzyme concentration and constant assay conditions. The concept of initial concentrations driving equilibrium leads to the chosen axes. Three apparent constants can be derived from this plot: K(max), K(min), and K(inflect). K(max) and K(min) represent the substrate to inhibitor concentration ratio for complete inhibition and minimal inhibition, respectively. K(inflect) represents the substrate to inhibitor concentration ratio at which the enzyme-substrate complex is equal to the inhibitory complex. These constants can be interpolated from the graph or calculated using the first and second derivative of the plot. We conclude that a steeper slope and a shift of the line to the right (increased x-axis values) would indicate a better inhibitor. Since initial velocity is not a linear function of the substrate/inhibitor ratio, this means that inhibition changes more quickly with the change in the [S]/ [I] ratio. When preincubating the enzyme with substrate before the addition of inhibitor, preincubating the enzyme with inhibitor before the addition of substrate or with concurrent addition of both substrate and inhibitor, modest changes in the slopes and y-intercepts were obtained. This plot appears useful for known competitive and non-competitive inhibitors and may have general applicability. Bentham Science Publishers 2015-08 2015-08 /pmc/articles/PMC5411997/ /pubmed/28503118 http://dx.doi.org/10.2174/1573408011666150605223952 Text en © 2015 Bentham Science Publishers https://creativecommons.org/licenses/by-nc/4.0/legalcode This is an open access article licensed under the terms of the Creative Commons Attribution-Non-Commercial 4.0 International Public License (CC BY-NC 4.0) (https://creativecommons.org/licenses/by-nc/4.0/legalcode), which permits unrestricted, non-commercial use, distribution and reproduction in any medium, provided the work is properly cited. |
spellingShingle | Article Baumhardt, Jordan M. Dorsey, Benjamin M. McLauchlan, Craig C. Jones, Marjorie A. An Additional Method for Analyzing the Reversible Inhibition of an Enzyme Using Acid Phosphatase as a Model |
title | An Additional Method for Analyzing the Reversible Inhibition of an
Enzyme Using Acid Phosphatase as a Model |
title_full | An Additional Method for Analyzing the Reversible Inhibition of an
Enzyme Using Acid Phosphatase as a Model |
title_fullStr | An Additional Method for Analyzing the Reversible Inhibition of an
Enzyme Using Acid Phosphatase as a Model |
title_full_unstemmed | An Additional Method for Analyzing the Reversible Inhibition of an
Enzyme Using Acid Phosphatase as a Model |
title_short | An Additional Method for Analyzing the Reversible Inhibition of an
Enzyme Using Acid Phosphatase as a Model |
title_sort | additional method for analyzing the reversible inhibition of an
enzyme using acid phosphatase as a model |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5411997/ https://www.ncbi.nlm.nih.gov/pubmed/28503118 http://dx.doi.org/10.2174/1573408011666150605223952 |
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