Cargando…

De Novo Assembly, Annotation, and Characterization of Root Transcriptomes of Three Caladium Cultivars with a Focus on Necrotrophic Pathogen Resistance/Defense-Related Genes

Roots are vital to plant survival and crop yield, yet few efforts have been made to characterize the expressed genes in the roots of non-model plants (root transcriptomes). This study was conducted to sequence, assemble, annotate, and characterize the root transcriptomes of three caladium cultivars...

Descripción completa

Detalles Bibliográficos
Autores principales:	Cao, Zhe, Deng, Zhanao
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2017
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5412298/ https://www.ncbi.nlm.nih.gov/pubmed/28346370 http://dx.doi.org/10.3390/ijms18040712

Ejemplares similares

A single gene controls leaf background color in caladium (Araceae) and is tightly linked to genes for leaf main vein color, spotting and rugosity
por: Cao, Zhe, et al.
Publicado: (2017)

Hot Water Tuber Treatments for Management of Meloidogyne Arenaria in Caladium Cultivars
por: Gu, Mengyi, et al.
Publicado: (2022)

Indole primes plant defense against necrotrophic fungal pathogen infection
por: Shen, Qinqin, et al.
Publicado: (2018)

Local and systemic defense response in Aspen clones: contrasting defense response to biotrophic and necrotrophic pathogens
por: Fossdal, Carl Gunnar, et al.
Publicado: (2011)

Transcriptome Analysis of Potato Infected with the Necrotrophic Pathogen Alternaria solani
por: Brouwer, Sophie M., et al.
Publicado: (2021)

De novo transcriptome assembly of two contrasting pumpkin cultivars
por: Xanthopoulou, Aliki, et al.
Publicado: (2016)

De novo transcriptome assembly of two different apricot cultivars
por: Jo, Yeonhwa, et al.
Publicado: (2015)

De novo transcriptome assembly of two different Prunus mume cultivars
por: Jo, Yeonhwa, et al.
Publicado: (2015)

De novo transcriptome assembly of a sour cherry cultivar, Schattenmorelle
por: Jo, Yeonhwa, et al.
Publicado: (2015)

De novo transcriptome assembly of two different Prunus salicina cultivars
por: Jo, Yeonhwa, et al.
Publicado: (2015)

Sequencing and de novo assembly of a Dahlia hybrid cultivar transcriptome
por: Lehnert, Erik M., et al.
Publicado: (2014)

De novo assembly, characterization and annotation for the transcriptome of Sarcocheilichthys sinensis
por: Zhu, Chuankun, et al.
Publicado: (2017)

A simple guide to de novo transcriptome assembly and annotation
por: Raghavan, Venket, et al.
Publicado: (2022)

Editorial: Necrotrophic Fungal Plant Pathogens
por: De Cal, Antonieta, et al.
Publicado: (2022)

De novo transcriptome assembly of two different peach cultivars grown in Korea
por: Jo, Yeonhwa, et al.
Publicado: (2015)

The transcription factor WRKY75 positively regulates jasmonate-mediated plant defense to necrotrophic fungal pathogens
por: Chen, Ligang, et al.
Publicado: (2020)

De Novo Assembly and Functional Annotation of the Olive (Olea europaea) Transcriptome
por: Muñoz-Mérida, Antonio, et al.
Publicado: (2013)

De novo Assembly and Annotation of the Antarctic Alga Prasiola crispa Transcriptome
por: Carvalho, Evelise L., et al.
Publicado: (2018)

De Novo Transcriptome Assembly and Functional Annotation in Five Species of Bats
por: Moreno-Santillán, Diana D., et al.
Publicado: (2019)

The Rhinella arenarum transcriptome: de novo assembly, annotation and gene prediction
por: Ceschin, Danilo Guillermo, et al.
Publicado: (2020)

De novo transcriptome assembly and gene annotation for the toxic dinoflagellate Dinophysis
por: Gaonkar, Chetan C., et al.
Publicado: (2023)

Report of the Parana coffee root-knot nematode, Meloidogyne paranaensis (Tylenchida: Meloidogynidae) from Caladium sp. in the continental United States
por: Subbotin, Sergei A., et al.
Publicado: (2022)

Plant-parasitic nematodes associated with the root zone of hop cultivars planted in a Florida field soil
por: Watson, Tristan T., et al.
Publicado: (2020)

Prior exposure of Arabidopsis seedlings to mechanical stress heightens jasmonic acid-mediated defense against necrotrophic pathogens
por: Brenya, Eric, et al.
Publicado: (2020)

De novo transcriptome assembly of ‘Angeleno’ and ‘Lamoon’ Japanese plum cultivars (Prunus salicina)
por: González, Máximo, et al.
Publicado: (2016)

The Arabidopsis altered in stress response2 is Impaired in Resistance to Root and Leaf Necrotrophic Fungal Pathogens
por: Thatcher, Louise F., et al.
Publicado: (2019)

Advanced Diagnostic Approaches for Necrotrophic Fungal Pathogens of Temperate Legumes With a Focus on Botrytis spp.
por: Bilkiss, Marzia, et al.
Publicado: (2019)

Complete Chloroplast Genome Sequences of Four Species in the Caladium Genus: Comparative and Phylogenetic Analyses
por: Ye, Yuanjun, et al.
Publicado: (2022)

De Novo Assembly and Annotation of Salvia splendens Transcriptome Using the Illumina Platform
por: Ge, Xiuxiu, et al.
Publicado: (2014)

Improved annotation with de novo transcriptome assembly in four social amoeba species
por: Singh, Reema, et al.
Publicado: (2017)

IDP-denovo: de novo transcriptome assembly and isoform annotation by hybrid sequencing
por: Fu, Shuhua, et al.
Publicado: (2018)

Data of de novo assembly and functional annotation of the leaf transcriptome of Impatiens balsamina
por: Foong, Lian Chee, et al.
Publicado: (2018)

Dataset of de novo assembly and functional annotation of the transcriptome of blueberry (Vaccinium spp.)
por: Qi, Xinpeng, et al.
Publicado: (2019)

De novo transcriptome assembly and annotation for gene discovery in avocado, macadamia and mango
por: Chabikwa, Tinashe G., et al.
Publicado: (2020)

Stress Response and Pathogenicity of the Necrotrophic Fungal Pathogen Alternaria alternata
por: Chung, Kuang-Ren
Publicado: (2012)

The transcriptome of a “sleeping” invader: de novo assembly and annotation of the transcriptome of aestivating Cornu aspersum
por: Parmakelis, Aristeidis, et al.
Publicado: (2017)

Comparative Analysis of Defense Responses in Chocolate Spot-Resistant and -Susceptible Faba Bean (Vicia faba) Cultivars Following Infection by the Necrotrophic Fungus Botrytis fabae
por: El-Komy, Mahmoud H.
Publicado: (2014)

WRKY70 and its homolog WRKY54 negatively modulate the cell wall-associated defenses to necrotrophic pathogens in Arabidopsis
por: Li, Jing, et al.
Publicado: (2017)

Transcriptome Analysis of the Necrotrophic Pathogen Alternaria brassicae Reveals Insights into Its Pathogenesis in Brassica juncea
por: Rajarammohan, Sivasubramanian
Publicado: (2023)

Characterization of Common Carp Transcriptome: Sequencing, De Novo Assembly, Annotation and Comparative Genomics
por: Ji, Peifeng, et al.
Publicado: (2012)

Cannot write session to /tmp/vufind_sessions/sess_3qnv110nda56qm6qntb6503jpc