Cargando…

IFT81 as a Candidate Gene for Nonsyndromic Retinal Degeneration

PURPOSE: IFT81, a core component of the IFT-B complex, involved in the bidirectional transport of ciliary proteins, has been recently implicated in syndromic ciliopathies. However, none of the IFT-B core complex proteins have been associated with nonsyndromic retinal dystrophies. Given the importanc...

Descripción completa

Detalles Bibliográficos
Autores principales: Dharmat, Rachayata, Liu, Wei, Ge, Zhongqi, Sun, Zixi, Yang, Lizhu, Li, Yumei, Wang, Keqing, Thomas, Kandace, Sui, Ruifang, Chen, Rui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Association for Research in Vision and Ophthalmology 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5413215/
https://www.ncbi.nlm.nih.gov/pubmed/28460050
http://dx.doi.org/10.1167/iovs.16-19133
_version_ 1783233140784889856
author Dharmat, Rachayata
Liu, Wei
Ge, Zhongqi
Sun, Zixi
Yang, Lizhu
Li, Yumei
Wang, Keqing
Thomas, Kandace
Sui, Ruifang
Chen, Rui
author_facet Dharmat, Rachayata
Liu, Wei
Ge, Zhongqi
Sun, Zixi
Yang, Lizhu
Li, Yumei
Wang, Keqing
Thomas, Kandace
Sui, Ruifang
Chen, Rui
author_sort Dharmat, Rachayata
collection PubMed
description PURPOSE: IFT81, a core component of the IFT-B complex, involved in the bidirectional transport of ciliary proteins, has been recently implicated in syndromic ciliopathies. However, none of the IFT-B core complex proteins have been associated with nonsyndromic retinal dystrophies. Given the importance of ciliary transport in photoreceptor function and structural maintenance, we sought to investigate the impact of IFT (intraflagellar transport) mutations in nonsyndromic retinopathies. METHODS: Whole exome sequencing was performed on 50 cone-rod dystrophy (CRD) patients that were previously screened for mutations in known retinal disease genes. The impact of candidate mutation was studied using in vitro cell system and in vivo zebrafish assay to determine the pathogenicity of the variant. RESULTS: Compound heterozygous mutations in IFT81, including one nonsense (c.1213C>T, p.R405*) and one missense variant (c.1841T>C, p.L614P), were identified in a nonsyndromic CRD proband. Extensive functional analyses of the missense variant in cell culture and zebrafish strongly suggests its pathogenic nature. Loss of IFT81 impairs ciliogenesis and, interestingly, the missense variant displayed significantly reduced rescue of ciliogenesis in the IFT81 knockdown in vitro system. Consistently, dramatic reduction of rescue efficiency of the ift81 mutant zebrafish embryo by mRNA with the missense variant was observed, further supporting its pathogenicity. CONCLUSIONS: Consistent with the function of the IFT-B complex in the maintenance of photoreceptor cilium, we report a case of mutations in a core IFT-B protein, IFT81. This represents the first report of mutations in IFT81 as a candidate gene for nonsyndromic retinal dystrophy, hence expanding the phenotype spectrum of IFT-B components.
format Online
Article
Text
id pubmed-5413215
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher The Association for Research in Vision and Ophthalmology
record_format MEDLINE/PubMed
spelling pubmed-54132152017-05-04 IFT81 as a Candidate Gene for Nonsyndromic Retinal Degeneration Dharmat, Rachayata Liu, Wei Ge, Zhongqi Sun, Zixi Yang, Lizhu Li, Yumei Wang, Keqing Thomas, Kandace Sui, Ruifang Chen, Rui Invest Ophthalmol Vis Sci Genetics PURPOSE: IFT81, a core component of the IFT-B complex, involved in the bidirectional transport of ciliary proteins, has been recently implicated in syndromic ciliopathies. However, none of the IFT-B core complex proteins have been associated with nonsyndromic retinal dystrophies. Given the importance of ciliary transport in photoreceptor function and structural maintenance, we sought to investigate the impact of IFT (intraflagellar transport) mutations in nonsyndromic retinopathies. METHODS: Whole exome sequencing was performed on 50 cone-rod dystrophy (CRD) patients that were previously screened for mutations in known retinal disease genes. The impact of candidate mutation was studied using in vitro cell system and in vivo zebrafish assay to determine the pathogenicity of the variant. RESULTS: Compound heterozygous mutations in IFT81, including one nonsense (c.1213C>T, p.R405*) and one missense variant (c.1841T>C, p.L614P), were identified in a nonsyndromic CRD proband. Extensive functional analyses of the missense variant in cell culture and zebrafish strongly suggests its pathogenic nature. Loss of IFT81 impairs ciliogenesis and, interestingly, the missense variant displayed significantly reduced rescue of ciliogenesis in the IFT81 knockdown in vitro system. Consistently, dramatic reduction of rescue efficiency of the ift81 mutant zebrafish embryo by mRNA with the missense variant was observed, further supporting its pathogenicity. CONCLUSIONS: Consistent with the function of the IFT-B complex in the maintenance of photoreceptor cilium, we report a case of mutations in a core IFT-B protein, IFT81. This represents the first report of mutations in IFT81 as a candidate gene for nonsyndromic retinal dystrophy, hence expanding the phenotype spectrum of IFT-B components. The Association for Research in Vision and Ophthalmology 2017-05 /pmc/articles/PMC5413215/ /pubmed/28460050 http://dx.doi.org/10.1167/iovs.16-19133 Text en Copyright 2017 The Authors http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License.
spellingShingle Genetics
Dharmat, Rachayata
Liu, Wei
Ge, Zhongqi
Sun, Zixi
Yang, Lizhu
Li, Yumei
Wang, Keqing
Thomas, Kandace
Sui, Ruifang
Chen, Rui
IFT81 as a Candidate Gene for Nonsyndromic Retinal Degeneration
title IFT81 as a Candidate Gene for Nonsyndromic Retinal Degeneration
title_full IFT81 as a Candidate Gene for Nonsyndromic Retinal Degeneration
title_fullStr IFT81 as a Candidate Gene for Nonsyndromic Retinal Degeneration
title_full_unstemmed IFT81 as a Candidate Gene for Nonsyndromic Retinal Degeneration
title_short IFT81 as a Candidate Gene for Nonsyndromic Retinal Degeneration
title_sort ift81 as a candidate gene for nonsyndromic retinal degeneration
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5413215/
https://www.ncbi.nlm.nih.gov/pubmed/28460050
http://dx.doi.org/10.1167/iovs.16-19133
work_keys_str_mv AT dharmatrachayata ift81asacandidategenefornonsyndromicretinaldegeneration
AT liuwei ift81asacandidategenefornonsyndromicretinaldegeneration
AT gezhongqi ift81asacandidategenefornonsyndromicretinaldegeneration
AT sunzixi ift81asacandidategenefornonsyndromicretinaldegeneration
AT yanglizhu ift81asacandidategenefornonsyndromicretinaldegeneration
AT liyumei ift81asacandidategenefornonsyndromicretinaldegeneration
AT wangkeqing ift81asacandidategenefornonsyndromicretinaldegeneration
AT thomaskandace ift81asacandidategenefornonsyndromicretinaldegeneration
AT suiruifang ift81asacandidategenefornonsyndromicretinaldegeneration
AT chenrui ift81asacandidategenefornonsyndromicretinaldegeneration