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Identification and sequence analyses of novel lipase encoding novel thermophillic bacilli isolated from Armenian geothermal springs

BACKGROUND: Among the huge diversity of thermophilic bacteria mainly bacilli have been reported as active thermostable lipase producers. Geothermal springs serve as the main source for isolation of thermostable lipase producing bacilli. Thermostable lipolytic enzymes, functioning in the harsh condit...

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Autores principales: Shahinyan, Grigor, Margaryan, Armine, Panosyan, Hovik, Trchounian, Armen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5414190/
https://www.ncbi.nlm.nih.gov/pubmed/28464816
http://dx.doi.org/10.1186/s12866-017-1016-4
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author Shahinyan, Grigor
Margaryan, Armine
Panosyan, Hovik
Trchounian, Armen
author_facet Shahinyan, Grigor
Margaryan, Armine
Panosyan, Hovik
Trchounian, Armen
author_sort Shahinyan, Grigor
collection PubMed
description BACKGROUND: Among the huge diversity of thermophilic bacteria mainly bacilli have been reported as active thermostable lipase producers. Geothermal springs serve as the main source for isolation of thermostable lipase producing bacilli. Thermostable lipolytic enzymes, functioning in the harsh conditions, have promising applications in processing of organic chemicals, detergent formulation, synthesis of biosurfactants, pharmaceutical processing etc. RESULTS: In order to study the distribution of lipase-producing thermophilic bacilli and their specific lipase protein primary structures, three lipase producers from different genera were isolated from mesothermal (27.5–70 °C) springs distributed on the territory of Armenia and Nagorno Karabakh. Based on phenotypic characteristics and 16S rRNA gene sequencing the isolates were identified as Geobacillus sp., Bacillus licheniformis and Anoxibacillus flavithermus strains. The lipase genes of isolates were sequenced by using initially designed primer sets. Multiple alignments generated from primary structures of the lipase proteins and annotated lipase protein sequences, conserved regions analysis and amino acid composition have illustrated the similarity (98–99%) of the lipases with true lipases (family I) and GDSL esterase family (family II). A conserved sequence block that determines the thermostability has been identified in the multiple alignments of the lipase proteins. CONCLUSIONS: The results are spreading light on the lipase producing bacilli distribution in geothermal springs in Armenia and Nagorno Karabakh. Newly isolated bacilli strains could be prospective source for thermostable lipases and their genes.
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spelling pubmed-54141902017-05-03 Identification and sequence analyses of novel lipase encoding novel thermophillic bacilli isolated from Armenian geothermal springs Shahinyan, Grigor Margaryan, Armine Panosyan, Hovik Trchounian, Armen BMC Microbiol Research Article BACKGROUND: Among the huge diversity of thermophilic bacteria mainly bacilli have been reported as active thermostable lipase producers. Geothermal springs serve as the main source for isolation of thermostable lipase producing bacilli. Thermostable lipolytic enzymes, functioning in the harsh conditions, have promising applications in processing of organic chemicals, detergent formulation, synthesis of biosurfactants, pharmaceutical processing etc. RESULTS: In order to study the distribution of lipase-producing thermophilic bacilli and their specific lipase protein primary structures, three lipase producers from different genera were isolated from mesothermal (27.5–70 °C) springs distributed on the territory of Armenia and Nagorno Karabakh. Based on phenotypic characteristics and 16S rRNA gene sequencing the isolates were identified as Geobacillus sp., Bacillus licheniformis and Anoxibacillus flavithermus strains. The lipase genes of isolates were sequenced by using initially designed primer sets. Multiple alignments generated from primary structures of the lipase proteins and annotated lipase protein sequences, conserved regions analysis and amino acid composition have illustrated the similarity (98–99%) of the lipases with true lipases (family I) and GDSL esterase family (family II). A conserved sequence block that determines the thermostability has been identified in the multiple alignments of the lipase proteins. CONCLUSIONS: The results are spreading light on the lipase producing bacilli distribution in geothermal springs in Armenia and Nagorno Karabakh. Newly isolated bacilli strains could be prospective source for thermostable lipases and their genes. BioMed Central 2017-05-02 /pmc/articles/PMC5414190/ /pubmed/28464816 http://dx.doi.org/10.1186/s12866-017-1016-4 Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Shahinyan, Grigor
Margaryan, Armine
Panosyan, Hovik
Trchounian, Armen
Identification and sequence analyses of novel lipase encoding novel thermophillic bacilli isolated from Armenian geothermal springs
title Identification and sequence analyses of novel lipase encoding novel thermophillic bacilli isolated from Armenian geothermal springs
title_full Identification and sequence analyses of novel lipase encoding novel thermophillic bacilli isolated from Armenian geothermal springs
title_fullStr Identification and sequence analyses of novel lipase encoding novel thermophillic bacilli isolated from Armenian geothermal springs
title_full_unstemmed Identification and sequence analyses of novel lipase encoding novel thermophillic bacilli isolated from Armenian geothermal springs
title_short Identification and sequence analyses of novel lipase encoding novel thermophillic bacilli isolated from Armenian geothermal springs
title_sort identification and sequence analyses of novel lipase encoding novel thermophillic bacilli isolated from armenian geothermal springs
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5414190/
https://www.ncbi.nlm.nih.gov/pubmed/28464816
http://dx.doi.org/10.1186/s12866-017-1016-4
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