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Recent advances in predicting gene–disease associations
Deciphering gene–disease association is a crucial step in designing therapeutic strategies against diseases. There are experimental methods for identifying gene–disease associations, such as genome-wide association studies and linkage analysis, but these can be expensive and time consuming. As a res...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
F1000Research
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5414807/ https://www.ncbi.nlm.nih.gov/pubmed/28529714 http://dx.doi.org/10.12688/f1000research.10788.1 |
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author | Opap, Kenneth Mulder, Nicola |
author_facet | Opap, Kenneth Mulder, Nicola |
author_sort | Opap, Kenneth |
collection | PubMed |
description | Deciphering gene–disease association is a crucial step in designing therapeutic strategies against diseases. There are experimental methods for identifying gene–disease associations, such as genome-wide association studies and linkage analysis, but these can be expensive and time consuming. As a result, various in silico methods for predicting associations from these and other data have been developed using different approaches. In this article, we review some of the recent approaches to the computational prediction of gene–disease association. We look at recent advancements in algorithms, categorising them into those based on genome variation, networks, text mining, and crowdsourcing. We also look at some of the challenges faced in the computational prediction of gene–disease associations. |
format | Online Article Text |
id | pubmed-5414807 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | F1000Research |
record_format | MEDLINE/PubMed |
spelling | pubmed-54148072017-05-18 Recent advances in predicting gene–disease associations Opap, Kenneth Mulder, Nicola F1000Res Review Deciphering gene–disease association is a crucial step in designing therapeutic strategies against diseases. There are experimental methods for identifying gene–disease associations, such as genome-wide association studies and linkage analysis, but these can be expensive and time consuming. As a result, various in silico methods for predicting associations from these and other data have been developed using different approaches. In this article, we review some of the recent approaches to the computational prediction of gene–disease association. We look at recent advancements in algorithms, categorising them into those based on genome variation, networks, text mining, and crowdsourcing. We also look at some of the challenges faced in the computational prediction of gene–disease associations. F1000Research 2017-04-26 /pmc/articles/PMC5414807/ /pubmed/28529714 http://dx.doi.org/10.12688/f1000research.10788.1 Text en Copyright: © 2017 Opap K and Mulder N http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Review Opap, Kenneth Mulder, Nicola Recent advances in predicting gene–disease associations |
title | Recent advances in predicting gene–disease associations |
title_full | Recent advances in predicting gene–disease associations |
title_fullStr | Recent advances in predicting gene–disease associations |
title_full_unstemmed | Recent advances in predicting gene–disease associations |
title_short | Recent advances in predicting gene–disease associations |
title_sort | recent advances in predicting gene–disease associations |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5414807/ https://www.ncbi.nlm.nih.gov/pubmed/28529714 http://dx.doi.org/10.12688/f1000research.10788.1 |
work_keys_str_mv | AT opapkenneth recentadvancesinpredictinggenediseaseassociations AT muldernicola recentadvancesinpredictinggenediseaseassociations |