Cargando…

Global miRNA expression profiling of domestic cat livers following acute Toxoplasma gondii infection

Although microRNAs (miRNAs) play an important role in liver homeostasis, the extent to which they can be altered by Toxoplasma gondii infection is unknown. Here, we utilized small RNA sequencing and bioinformatic analyses to characterize miRNA expression profiles in the liver of domestic cats at 7 d...

Descripción completa

Detalles Bibliográficos
Autores principales: Cong, Wei, Zhang, Xiao-Xuan, He, Jun-Jun, Li, Fa-Cai, Elsheikha, Hany M., Zhu, Xing-Quan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5421954/
https://www.ncbi.nlm.nih.gov/pubmed/28424428
http://dx.doi.org/10.18632/oncotarget.16108
_version_ 1783234689711996928
author Cong, Wei
Zhang, Xiao-Xuan
He, Jun-Jun
Li, Fa-Cai
Elsheikha, Hany M.
Zhu, Xing-Quan
author_facet Cong, Wei
Zhang, Xiao-Xuan
He, Jun-Jun
Li, Fa-Cai
Elsheikha, Hany M.
Zhu, Xing-Quan
author_sort Cong, Wei
collection PubMed
description Although microRNAs (miRNAs) play an important role in liver homeostasis, the extent to which they can be altered by Toxoplasma gondii infection is unknown. Here, we utilized small RNA sequencing and bioinformatic analyses to characterize miRNA expression profiles in the liver of domestic cats at 7 days after oral infection with T. gondii (Type II) strain. A total of 384 miRNAs were identified and 82 were differentially expressed, of which 33 were up-regulated and 49 down-regulated. Also, 5690 predicted host gene targets for the differentially expressed miRNAs were identified using the bioinformatic algorithm miRanda. Gene ontology analysis revealed that the predicted gene targets of the dysregulated miRNAs were significantly enriched in apoptosis. Kyoto Encyclopedia of Genes and Genomes analysis showed that the predicted gene targets were involved in several pathways, including acute myeloid leukemia, central carbon metabolism in cancer, choline metabolism in cancer, estrogen signaling pathway, fatty acid degradation, lysosome, nucleotide excision repair, progesterone-mediated oocyte maturation, and VEGF signaling pathway. The expression level of 6 upregulated miRNAs (mmu-miR-21a-5p, mmu-miR-20a-5p, mmu-miR-17-5p, mmu-miR-30e-3p, mmu-miR-142a-3p, and mmu-miR-106b-3p) was confirmed by stem-loop quantitative reverse transcription PCR, which yielded results consistent with the sequencing data. These findings expand our understanding of the regulatory mechanisms of miRNAs underlying T. gondii pathogenesis and contribute new database information on cat miRNAs, opening a new perspective on the prevention and treatment of T. gondii infection.
format Online
Article
Text
id pubmed-5421954
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Impact Journals LLC
record_format MEDLINE/PubMed
spelling pubmed-54219542017-05-10 Global miRNA expression profiling of domestic cat livers following acute Toxoplasma gondii infection Cong, Wei Zhang, Xiao-Xuan He, Jun-Jun Li, Fa-Cai Elsheikha, Hany M. Zhu, Xing-Quan Oncotarget Research Paper Although microRNAs (miRNAs) play an important role in liver homeostasis, the extent to which they can be altered by Toxoplasma gondii infection is unknown. Here, we utilized small RNA sequencing and bioinformatic analyses to characterize miRNA expression profiles in the liver of domestic cats at 7 days after oral infection with T. gondii (Type II) strain. A total of 384 miRNAs were identified and 82 were differentially expressed, of which 33 were up-regulated and 49 down-regulated. Also, 5690 predicted host gene targets for the differentially expressed miRNAs were identified using the bioinformatic algorithm miRanda. Gene ontology analysis revealed that the predicted gene targets of the dysregulated miRNAs were significantly enriched in apoptosis. Kyoto Encyclopedia of Genes and Genomes analysis showed that the predicted gene targets were involved in several pathways, including acute myeloid leukemia, central carbon metabolism in cancer, choline metabolism in cancer, estrogen signaling pathway, fatty acid degradation, lysosome, nucleotide excision repair, progesterone-mediated oocyte maturation, and VEGF signaling pathway. The expression level of 6 upregulated miRNAs (mmu-miR-21a-5p, mmu-miR-20a-5p, mmu-miR-17-5p, mmu-miR-30e-3p, mmu-miR-142a-3p, and mmu-miR-106b-3p) was confirmed by stem-loop quantitative reverse transcription PCR, which yielded results consistent with the sequencing data. These findings expand our understanding of the regulatory mechanisms of miRNAs underlying T. gondii pathogenesis and contribute new database information on cat miRNAs, opening a new perspective on the prevention and treatment of T. gondii infection. Impact Journals LLC 2017-03-10 /pmc/articles/PMC5421954/ /pubmed/28424428 http://dx.doi.org/10.18632/oncotarget.16108 Text en Copyright: © 2017 Cong et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) (CC-BY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Cong, Wei
Zhang, Xiao-Xuan
He, Jun-Jun
Li, Fa-Cai
Elsheikha, Hany M.
Zhu, Xing-Quan
Global miRNA expression profiling of domestic cat livers following acute Toxoplasma gondii infection
title Global miRNA expression profiling of domestic cat livers following acute Toxoplasma gondii infection
title_full Global miRNA expression profiling of domestic cat livers following acute Toxoplasma gondii infection
title_fullStr Global miRNA expression profiling of domestic cat livers following acute Toxoplasma gondii infection
title_full_unstemmed Global miRNA expression profiling of domestic cat livers following acute Toxoplasma gondii infection
title_short Global miRNA expression profiling of domestic cat livers following acute Toxoplasma gondii infection
title_sort global mirna expression profiling of domestic cat livers following acute toxoplasma gondii infection
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5421954/
https://www.ncbi.nlm.nih.gov/pubmed/28424428
http://dx.doi.org/10.18632/oncotarget.16108
work_keys_str_mv AT congwei globalmirnaexpressionprofilingofdomesticcatliversfollowingacutetoxoplasmagondiiinfection
AT zhangxiaoxuan globalmirnaexpressionprofilingofdomesticcatliversfollowingacutetoxoplasmagondiiinfection
AT hejunjun globalmirnaexpressionprofilingofdomesticcatliversfollowingacutetoxoplasmagondiiinfection
AT lifacai globalmirnaexpressionprofilingofdomesticcatliversfollowingacutetoxoplasmagondiiinfection
AT elsheikhahanym globalmirnaexpressionprofilingofdomesticcatliversfollowingacutetoxoplasmagondiiinfection
AT zhuxingquan globalmirnaexpressionprofilingofdomesticcatliversfollowingacutetoxoplasmagondiiinfection