PALADIN: protein alignment for functional profiling whole metagenome shotgun data

MOTIVATION: Whole metagenome shotgun sequencing is a powerful approach for assaying the functional potential of microbial communities. We currently lack tools that efficiently and accurately align DNA reads against protein references, the technique necessary for constructing a functional profile. He...

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Detalles Bibliográficos
Autores principales: Westbrook, Anthony, Ramsdell, Jordan, Schuelke, Taruna, Normington, Louisa, Bergeron, R Daniel, Thomas, W Kelley, MacManes, Matthew D
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2017
Materias:
Original Papers
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5423455/
https://www.ncbi.nlm.nih.gov/pubmed/28158639
http://dx.doi.org/10.1093/bioinformatics/btx021

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5423455/
https://www.ncbi.nlm.nih.gov/pubmed/28158639
http://dx.doi.org/10.1093/bioinformatics/btx021

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