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Transgenic switchgrass (Panicum virgatum L.) targeted for reduced recalcitrance to bioconversion: a 2‐year comparative analysis of field‐grown lines modified for target gene or genetic element expression

Transgenic Panicum virgatum L. silencing (KD) or overexpressing (OE) specific genes or a small RNA (GAUT4‐KD, miRNA156‐OE, MYB4‐OE,COMT‐KD and FPGS‐KD) was grown in the field and aerial tissue analysed for biofuel production traits. Clones representing independent transgenic lines were established a...

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Autores principales: Dumitrache, Alexandru, Natzke, Jace, Rodriguez, Miguel, Yee, Kelsey L., Thompson, Olivia A., Poovaiah, Charleson R., Shen, Hui, Mazarei, Mitra, Baxter, Holly L., Fu, Chunxiang, Wang, Zeng‐Yu, Biswal, Ajaya K., Li, Guifen, Srivastava, Avinash C., Tang, Yuhong, Stewart, Charles Neal, Dixon, Richard A., Nelson, Richard S., Mohnen, Debra, Mielenz, Jonathan, Brown, Steven D., Davison, Brian H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5425389/
https://www.ncbi.nlm.nih.gov/pubmed/27862852
http://dx.doi.org/10.1111/pbi.12666
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author Dumitrache, Alexandru
Natzke, Jace
Rodriguez, Miguel
Yee, Kelsey L.
Thompson, Olivia A.
Poovaiah, Charleson R.
Shen, Hui
Mazarei, Mitra
Baxter, Holly L.
Fu, Chunxiang
Wang, Zeng‐Yu
Biswal, Ajaya K.
Li, Guifen
Srivastava, Avinash C.
Tang, Yuhong
Stewart, Charles Neal
Dixon, Richard A.
Nelson, Richard S.
Mohnen, Debra
Mielenz, Jonathan
Brown, Steven D.
Davison, Brian H.
author_facet Dumitrache, Alexandru
Natzke, Jace
Rodriguez, Miguel
Yee, Kelsey L.
Thompson, Olivia A.
Poovaiah, Charleson R.
Shen, Hui
Mazarei, Mitra
Baxter, Holly L.
Fu, Chunxiang
Wang, Zeng‐Yu
Biswal, Ajaya K.
Li, Guifen
Srivastava, Avinash C.
Tang, Yuhong
Stewart, Charles Neal
Dixon, Richard A.
Nelson, Richard S.
Mohnen, Debra
Mielenz, Jonathan
Brown, Steven D.
Davison, Brian H.
author_sort Dumitrache, Alexandru
collection PubMed
description Transgenic Panicum virgatum L. silencing (KD) or overexpressing (OE) specific genes or a small RNA (GAUT4‐KD, miRNA156‐OE, MYB4‐OE,COMT‐KD and FPGS‐KD) was grown in the field and aerial tissue analysed for biofuel production traits. Clones representing independent transgenic lines were established and senesced tissue was sampled after year 1 and 2 growth cycles. Biomass was analysed for wall sugars, recalcitrance to enzymatic digestibility and biofuel production using separate hydrolysis and fermentation. No correlation was found between plant carbohydrate content and biofuel production pointing to overriding structural and compositional elements that influence recalcitrance. Biomass yields were greater for all lines in the second year as plants establish in the field and standard amounts of biomass analysed from each line had more glucan, xylan and less ethanol (g/g basis) in the second‐ versus the first‐year samples, pointing to a broad increase in tissue recalcitrance after regrowth from the perennial root. However, biomass from second‐year growth of transgenics targeted for wall modification, GAUT4‐KD,MYB4‐OE,COMT‐KD and FPGS‐KD, had increased carbohydrate and ethanol yields (up to 12% and 21%, respectively) compared with control samples. The parental plant lines were found to have a significant impact on recalcitrance which can be exploited in future strategies. This summarizes progress towards generating next‐generation bio‐feedstocks with improved properties for microbial and enzymatic deconstruction, while providing a comprehensive quantitative analysis for the bioconversion of multiple plant lines in five transgenic strategies.
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spelling pubmed-54253892017-06-01 Transgenic switchgrass (Panicum virgatum L.) targeted for reduced recalcitrance to bioconversion: a 2‐year comparative analysis of field‐grown lines modified for target gene or genetic element expression Dumitrache, Alexandru Natzke, Jace Rodriguez, Miguel Yee, Kelsey L. Thompson, Olivia A. Poovaiah, Charleson R. Shen, Hui Mazarei, Mitra Baxter, Holly L. Fu, Chunxiang Wang, Zeng‐Yu Biswal, Ajaya K. Li, Guifen Srivastava, Avinash C. Tang, Yuhong Stewart, Charles Neal Dixon, Richard A. Nelson, Richard S. Mohnen, Debra Mielenz, Jonathan Brown, Steven D. Davison, Brian H. Plant Biotechnol J Research Articles Transgenic Panicum virgatum L. silencing (KD) or overexpressing (OE) specific genes or a small RNA (GAUT4‐KD, miRNA156‐OE, MYB4‐OE,COMT‐KD and FPGS‐KD) was grown in the field and aerial tissue analysed for biofuel production traits. Clones representing independent transgenic lines were established and senesced tissue was sampled after year 1 and 2 growth cycles. Biomass was analysed for wall sugars, recalcitrance to enzymatic digestibility and biofuel production using separate hydrolysis and fermentation. No correlation was found between plant carbohydrate content and biofuel production pointing to overriding structural and compositional elements that influence recalcitrance. Biomass yields were greater for all lines in the second year as plants establish in the field and standard amounts of biomass analysed from each line had more glucan, xylan and less ethanol (g/g basis) in the second‐ versus the first‐year samples, pointing to a broad increase in tissue recalcitrance after regrowth from the perennial root. However, biomass from second‐year growth of transgenics targeted for wall modification, GAUT4‐KD,MYB4‐OE,COMT‐KD and FPGS‐KD, had increased carbohydrate and ethanol yields (up to 12% and 21%, respectively) compared with control samples. The parental plant lines were found to have a significant impact on recalcitrance which can be exploited in future strategies. This summarizes progress towards generating next‐generation bio‐feedstocks with improved properties for microbial and enzymatic deconstruction, while providing a comprehensive quantitative analysis for the bioconversion of multiple plant lines in five transgenic strategies. John Wiley and Sons Inc. 2017-02-20 2017-06 /pmc/articles/PMC5425389/ /pubmed/27862852 http://dx.doi.org/10.1111/pbi.12666 Text en © 2016 The Authors. Plant Biotechnology Journal published by Society for Experimental Biology and The Association of Applied Biologists and John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Dumitrache, Alexandru
Natzke, Jace
Rodriguez, Miguel
Yee, Kelsey L.
Thompson, Olivia A.
Poovaiah, Charleson R.
Shen, Hui
Mazarei, Mitra
Baxter, Holly L.
Fu, Chunxiang
Wang, Zeng‐Yu
Biswal, Ajaya K.
Li, Guifen
Srivastava, Avinash C.
Tang, Yuhong
Stewart, Charles Neal
Dixon, Richard A.
Nelson, Richard S.
Mohnen, Debra
Mielenz, Jonathan
Brown, Steven D.
Davison, Brian H.
Transgenic switchgrass (Panicum virgatum L.) targeted for reduced recalcitrance to bioconversion: a 2‐year comparative analysis of field‐grown lines modified for target gene or genetic element expression
title Transgenic switchgrass (Panicum virgatum L.) targeted for reduced recalcitrance to bioconversion: a 2‐year comparative analysis of field‐grown lines modified for target gene or genetic element expression
title_full Transgenic switchgrass (Panicum virgatum L.) targeted for reduced recalcitrance to bioconversion: a 2‐year comparative analysis of field‐grown lines modified for target gene or genetic element expression
title_fullStr Transgenic switchgrass (Panicum virgatum L.) targeted for reduced recalcitrance to bioconversion: a 2‐year comparative analysis of field‐grown lines modified for target gene or genetic element expression
title_full_unstemmed Transgenic switchgrass (Panicum virgatum L.) targeted for reduced recalcitrance to bioconversion: a 2‐year comparative analysis of field‐grown lines modified for target gene or genetic element expression
title_short Transgenic switchgrass (Panicum virgatum L.) targeted for reduced recalcitrance to bioconversion: a 2‐year comparative analysis of field‐grown lines modified for target gene or genetic element expression
title_sort transgenic switchgrass (panicum virgatum l.) targeted for reduced recalcitrance to bioconversion: a 2‐year comparative analysis of field‐grown lines modified for target gene or genetic element expression
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5425389/
https://www.ncbi.nlm.nih.gov/pubmed/27862852
http://dx.doi.org/10.1111/pbi.12666
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