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Accuracy Test of the OPLS-AA Force Field for Calculating Free Energies of Mixing and Comparison with PAC-MAC

[Image: see text] We have calculated the excess free energy of mixing of 1053 binary mixtures with the OPLS-AA force field using two different methods: thermodynamic integration (TI) of molecular dynamics simulations and the Pair Configuration to Molecular Activity Coefficient (PAC-MAC) method. PAC-...

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Autores principales: Sweere, Augustinus J. M., Fraaije, Johannes G. E. M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2017
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5425945/
https://www.ncbi.nlm.nih.gov/pubmed/28418655
http://dx.doi.org/10.1021/acs.jctc.6b01106
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author Sweere, Augustinus J. M.
Fraaije, Johannes G. E. M.
author_facet Sweere, Augustinus J. M.
Fraaije, Johannes G. E. M.
author_sort Sweere, Augustinus J. M.
collection PubMed
description [Image: see text] We have calculated the excess free energy of mixing of 1053 binary mixtures with the OPLS-AA force field using two different methods: thermodynamic integration (TI) of molecular dynamics simulations and the Pair Configuration to Molecular Activity Coefficient (PAC-MAC) method. PAC-MAC is a force field based quasi-chemical method for predicting miscibility properties of various binary mixtures. The TI calculations yield a root mean squared error (RMSE) compared to experimental data of 0.132 k(B)T (0.37 kJ/mol). PAC-MAC shows a RMSE of 0.151 k(B)T with a calculation speed being potentially 1.0 × 10(4) times greater than TI. OPLS-AA force field parameters are optimized using PAC-MAC based on vapor–liquid equilibrium data, instead of enthalpies of vaporization or densities. The RMSE of PAC-MAC is reduced to 0.099 k(B)T by optimizing 50 force field parameters. The resulting OPLS-PM force field has a comparable accuracy as the OPLS-AA force field in the calculation of mixing free energies using TI.
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spelling pubmed-54259452017-05-12 Accuracy Test of the OPLS-AA Force Field for Calculating Free Energies of Mixing and Comparison with PAC-MAC Sweere, Augustinus J. M. Fraaije, Johannes G. E. M. J Chem Theory Comput [Image: see text] We have calculated the excess free energy of mixing of 1053 binary mixtures with the OPLS-AA force field using two different methods: thermodynamic integration (TI) of molecular dynamics simulations and the Pair Configuration to Molecular Activity Coefficient (PAC-MAC) method. PAC-MAC is a force field based quasi-chemical method for predicting miscibility properties of various binary mixtures. The TI calculations yield a root mean squared error (RMSE) compared to experimental data of 0.132 k(B)T (0.37 kJ/mol). PAC-MAC shows a RMSE of 0.151 k(B)T with a calculation speed being potentially 1.0 × 10(4) times greater than TI. OPLS-AA force field parameters are optimized using PAC-MAC based on vapor–liquid equilibrium data, instead of enthalpies of vaporization or densities. The RMSE of PAC-MAC is reduced to 0.099 k(B)T by optimizing 50 force field parameters. The resulting OPLS-PM force field has a comparable accuracy as the OPLS-AA force field in the calculation of mixing free energies using TI. American Chemical Society 2017-04-18 2017-05-09 /pmc/articles/PMC5425945/ /pubmed/28418655 http://dx.doi.org/10.1021/acs.jctc.6b01106 Text en Copyright © 2017 American Chemical Society This is an open access article published under a Creative Commons Non-Commercial No Derivative Works (CC-BY-NC-ND) Attribution License (http://pubs.acs.org/page/policy/authorchoice_ccbyncnd_termsofuse.html) , which permits copying and redistribution of the article, and creation of adaptations, all for non-commercial purposes.
spellingShingle Sweere, Augustinus J. M.
Fraaije, Johannes G. E. M.
Accuracy Test of the OPLS-AA Force Field for Calculating Free Energies of Mixing and Comparison with PAC-MAC
title Accuracy Test of the OPLS-AA Force Field for Calculating Free Energies of Mixing and Comparison with PAC-MAC
title_full Accuracy Test of the OPLS-AA Force Field for Calculating Free Energies of Mixing and Comparison with PAC-MAC
title_fullStr Accuracy Test of the OPLS-AA Force Field for Calculating Free Energies of Mixing and Comparison with PAC-MAC
title_full_unstemmed Accuracy Test of the OPLS-AA Force Field for Calculating Free Energies of Mixing and Comparison with PAC-MAC
title_short Accuracy Test of the OPLS-AA Force Field for Calculating Free Energies of Mixing and Comparison with PAC-MAC
title_sort accuracy test of the opls-aa force field for calculating free energies of mixing and comparison with pac-mac
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5425945/
https://www.ncbi.nlm.nih.gov/pubmed/28418655
http://dx.doi.org/10.1021/acs.jctc.6b01106
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