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Network science meets respiratory medicine for OSAS phenotyping and severity prediction

Obstructive sleep apnea syndrome (OSAS) is a common clinical condition. The way that OSAS risk factors associate and converge is not a random process. As such, defining OSAS phenotypes fosters personalized patient management and population screening. In this paper, we present a network-based observa...

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Autores principales: Mihaicuta, Stefan, Udrescu, Mihai, Topirceanu, Alexandru, Udrescu, Lucretia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5426352/
https://www.ncbi.nlm.nih.gov/pubmed/28503375
http://dx.doi.org/10.7717/peerj.3289
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author Mihaicuta, Stefan
Udrescu, Mihai
Topirceanu, Alexandru
Udrescu, Lucretia
author_facet Mihaicuta, Stefan
Udrescu, Mihai
Topirceanu, Alexandru
Udrescu, Lucretia
author_sort Mihaicuta, Stefan
collection PubMed
description Obstructive sleep apnea syndrome (OSAS) is a common clinical condition. The way that OSAS risk factors associate and converge is not a random process. As such, defining OSAS phenotypes fosters personalized patient management and population screening. In this paper, we present a network-based observational, retrospective study on a cohort of 1,371 consecutive OSAS patients and 611 non-OSAS control patients in order to explore the risk factor associations and their correlation with OSAS comorbidities. To this end, we construct the Apnea Patients Network (APN) using patient compatibility relationships according to six objective parameters: age, gender, body mass index (BMI), blood pressure (BP), neck circumference (NC) and the Epworth sleepiness score (ESS). By running targeted network clustering algorithms, we identify eight patient phenotypes and corroborate them with the co-morbidity types. Also, by employing machine learning on the uncovered phenotypes, we derive a classification tree and introduce a computational framework which render the Sleep Apnea Syndrome Score (SAS(Score)); our OSAS score is implemented as an easy-to-use, web-based computer program which requires less than one minute for processing one individual. Our evaluation, performed on a distinct validation database with 231 consecutive patients, reveals that OSAS prediction with SAS(Score) has a significant specificity improvement (an increase of 234%) for only 8.2% sensitivity decrease in comparison with the state-of-the-art score STOP-BANG. The fact that SAS(Score) has bigger specificity makes it appropriate for OSAS screening and risk prediction in big, general populations.
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spelling pubmed-54263522017-05-12 Network science meets respiratory medicine for OSAS phenotyping and severity prediction Mihaicuta, Stefan Udrescu, Mihai Topirceanu, Alexandru Udrescu, Lucretia PeerJ Bioinformatics Obstructive sleep apnea syndrome (OSAS) is a common clinical condition. The way that OSAS risk factors associate and converge is not a random process. As such, defining OSAS phenotypes fosters personalized patient management and population screening. In this paper, we present a network-based observational, retrospective study on a cohort of 1,371 consecutive OSAS patients and 611 non-OSAS control patients in order to explore the risk factor associations and their correlation with OSAS comorbidities. To this end, we construct the Apnea Patients Network (APN) using patient compatibility relationships according to six objective parameters: age, gender, body mass index (BMI), blood pressure (BP), neck circumference (NC) and the Epworth sleepiness score (ESS). By running targeted network clustering algorithms, we identify eight patient phenotypes and corroborate them with the co-morbidity types. Also, by employing machine learning on the uncovered phenotypes, we derive a classification tree and introduce a computational framework which render the Sleep Apnea Syndrome Score (SAS(Score)); our OSAS score is implemented as an easy-to-use, web-based computer program which requires less than one minute for processing one individual. Our evaluation, performed on a distinct validation database with 231 consecutive patients, reveals that OSAS prediction with SAS(Score) has a significant specificity improvement (an increase of 234%) for only 8.2% sensitivity decrease in comparison with the state-of-the-art score STOP-BANG. The fact that SAS(Score) has bigger specificity makes it appropriate for OSAS screening and risk prediction in big, general populations. PeerJ Inc. 2017-05-09 /pmc/articles/PMC5426352/ /pubmed/28503375 http://dx.doi.org/10.7717/peerj.3289 Text en ©2017 Mihaicuta et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Mihaicuta, Stefan
Udrescu, Mihai
Topirceanu, Alexandru
Udrescu, Lucretia
Network science meets respiratory medicine for OSAS phenotyping and severity prediction
title Network science meets respiratory medicine for OSAS phenotyping and severity prediction
title_full Network science meets respiratory medicine for OSAS phenotyping and severity prediction
title_fullStr Network science meets respiratory medicine for OSAS phenotyping and severity prediction
title_full_unstemmed Network science meets respiratory medicine for OSAS phenotyping and severity prediction
title_short Network science meets respiratory medicine for OSAS phenotyping and severity prediction
title_sort network science meets respiratory medicine for osas phenotyping and severity prediction
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5426352/
https://www.ncbi.nlm.nih.gov/pubmed/28503375
http://dx.doi.org/10.7717/peerj.3289
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AT topirceanualexandru networksciencemeetsrespiratorymedicineforosasphenotypingandseverityprediction
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