Cargando…

Amplification on Undirected Population Structures: Comets Beat Stars

The fixation probability is the probability that a new mutant introduced in a homogeneous population eventually takes over the entire population. The fixation probability is a fundamental quantity of natural selection, and known to depend on the population structure. Amplifiers of natural selection...

Descripción completa

Detalles Bibliográficos
Autores principales: Pavlogiannis, Andreas, Tkadlec, Josef, Chatterjee, Krishnendu, Nowak, Martin A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5427850/
https://www.ncbi.nlm.nih.gov/pubmed/28250441
http://dx.doi.org/10.1038/s41598-017-00107-w
_version_ 1783235706672381952
author Pavlogiannis, Andreas
Tkadlec, Josef
Chatterjee, Krishnendu
Nowak, Martin A.
author_facet Pavlogiannis, Andreas
Tkadlec, Josef
Chatterjee, Krishnendu
Nowak, Martin A.
author_sort Pavlogiannis, Andreas
collection PubMed
description The fixation probability is the probability that a new mutant introduced in a homogeneous population eventually takes over the entire population. The fixation probability is a fundamental quantity of natural selection, and known to depend on the population structure. Amplifiers of natural selection are population structures which increase the fixation probability of advantageous mutants, as compared to the baseline case of well-mixed populations. In this work we focus on symmetric population structures represented as undirected graphs. In the regime of undirected graphs, the strongest amplifier known has been the Star graph, and the existence of undirected graphs with stronger amplification properties has remained open for over a decade. In this work we present the Comet and Comet-swarm families of undirected graphs. We show that for a range of fitness values of the mutants, the Comet and Comet-swarm graphs have fixation probability strictly larger than the fixation probability of the Star graph, for fixed population size and at the limit of large populations, respectively.
format Online
Article
Text
id pubmed-5427850
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-54278502017-05-12 Amplification on Undirected Population Structures: Comets Beat Stars Pavlogiannis, Andreas Tkadlec, Josef Chatterjee, Krishnendu Nowak, Martin A. Sci Rep Article The fixation probability is the probability that a new mutant introduced in a homogeneous population eventually takes over the entire population. The fixation probability is a fundamental quantity of natural selection, and known to depend on the population structure. Amplifiers of natural selection are population structures which increase the fixation probability of advantageous mutants, as compared to the baseline case of well-mixed populations. In this work we focus on symmetric population structures represented as undirected graphs. In the regime of undirected graphs, the strongest amplifier known has been the Star graph, and the existence of undirected graphs with stronger amplification properties has remained open for over a decade. In this work we present the Comet and Comet-swarm families of undirected graphs. We show that for a range of fitness values of the mutants, the Comet and Comet-swarm graphs have fixation probability strictly larger than the fixation probability of the Star graph, for fixed population size and at the limit of large populations, respectively. Nature Publishing Group UK 2017-03-06 /pmc/articles/PMC5427850/ /pubmed/28250441 http://dx.doi.org/10.1038/s41598-017-00107-w Text en © The Author(s) 2017 This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Pavlogiannis, Andreas
Tkadlec, Josef
Chatterjee, Krishnendu
Nowak, Martin A.
Amplification on Undirected Population Structures: Comets Beat Stars
title Amplification on Undirected Population Structures: Comets Beat Stars
title_full Amplification on Undirected Population Structures: Comets Beat Stars
title_fullStr Amplification on Undirected Population Structures: Comets Beat Stars
title_full_unstemmed Amplification on Undirected Population Structures: Comets Beat Stars
title_short Amplification on Undirected Population Structures: Comets Beat Stars
title_sort amplification on undirected population structures: comets beat stars
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5427850/
https://www.ncbi.nlm.nih.gov/pubmed/28250441
http://dx.doi.org/10.1038/s41598-017-00107-w
work_keys_str_mv AT pavlogiannisandreas amplificationonundirectedpopulationstructurescometsbeatstars
AT tkadlecjosef amplificationonundirectedpopulationstructurescometsbeatstars
AT chatterjeekrishnendu amplificationonundirectedpopulationstructurescometsbeatstars
AT nowakmartina amplificationonundirectedpopulationstructurescometsbeatstars