Cargando…
Amplification on Undirected Population Structures: Comets Beat Stars
The fixation probability is the probability that a new mutant introduced in a homogeneous population eventually takes over the entire population. The fixation probability is a fundamental quantity of natural selection, and known to depend on the population structure. Amplifiers of natural selection...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5427850/ https://www.ncbi.nlm.nih.gov/pubmed/28250441 http://dx.doi.org/10.1038/s41598-017-00107-w |
_version_ | 1783235706672381952 |
---|---|
author | Pavlogiannis, Andreas Tkadlec, Josef Chatterjee, Krishnendu Nowak, Martin A. |
author_facet | Pavlogiannis, Andreas Tkadlec, Josef Chatterjee, Krishnendu Nowak, Martin A. |
author_sort | Pavlogiannis, Andreas |
collection | PubMed |
description | The fixation probability is the probability that a new mutant introduced in a homogeneous population eventually takes over the entire population. The fixation probability is a fundamental quantity of natural selection, and known to depend on the population structure. Amplifiers of natural selection are population structures which increase the fixation probability of advantageous mutants, as compared to the baseline case of well-mixed populations. In this work we focus on symmetric population structures represented as undirected graphs. In the regime of undirected graphs, the strongest amplifier known has been the Star graph, and the existence of undirected graphs with stronger amplification properties has remained open for over a decade. In this work we present the Comet and Comet-swarm families of undirected graphs. We show that for a range of fitness values of the mutants, the Comet and Comet-swarm graphs have fixation probability strictly larger than the fixation probability of the Star graph, for fixed population size and at the limit of large populations, respectively. |
format | Online Article Text |
id | pubmed-5427850 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-54278502017-05-12 Amplification on Undirected Population Structures: Comets Beat Stars Pavlogiannis, Andreas Tkadlec, Josef Chatterjee, Krishnendu Nowak, Martin A. Sci Rep Article The fixation probability is the probability that a new mutant introduced in a homogeneous population eventually takes over the entire population. The fixation probability is a fundamental quantity of natural selection, and known to depend on the population structure. Amplifiers of natural selection are population structures which increase the fixation probability of advantageous mutants, as compared to the baseline case of well-mixed populations. In this work we focus on symmetric population structures represented as undirected graphs. In the regime of undirected graphs, the strongest amplifier known has been the Star graph, and the existence of undirected graphs with stronger amplification properties has remained open for over a decade. In this work we present the Comet and Comet-swarm families of undirected graphs. We show that for a range of fitness values of the mutants, the Comet and Comet-swarm graphs have fixation probability strictly larger than the fixation probability of the Star graph, for fixed population size and at the limit of large populations, respectively. Nature Publishing Group UK 2017-03-06 /pmc/articles/PMC5427850/ /pubmed/28250441 http://dx.doi.org/10.1038/s41598-017-00107-w Text en © The Author(s) 2017 This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Pavlogiannis, Andreas Tkadlec, Josef Chatterjee, Krishnendu Nowak, Martin A. Amplification on Undirected Population Structures: Comets Beat Stars |
title | Amplification on Undirected Population Structures: Comets Beat Stars |
title_full | Amplification on Undirected Population Structures: Comets Beat Stars |
title_fullStr | Amplification on Undirected Population Structures: Comets Beat Stars |
title_full_unstemmed | Amplification on Undirected Population Structures: Comets Beat Stars |
title_short | Amplification on Undirected Population Structures: Comets Beat Stars |
title_sort | amplification on undirected population structures: comets beat stars |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5427850/ https://www.ncbi.nlm.nih.gov/pubmed/28250441 http://dx.doi.org/10.1038/s41598-017-00107-w |
work_keys_str_mv | AT pavlogiannisandreas amplificationonundirectedpopulationstructurescometsbeatstars AT tkadlecjosef amplificationonundirectedpopulationstructurescometsbeatstars AT chatterjeekrishnendu amplificationonundirectedpopulationstructurescometsbeatstars AT nowakmartina amplificationonundirectedpopulationstructurescometsbeatstars |