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Fast iodide-SAD phasing for high-throughput membrane protein structure determination

We describe a fast, easy, and potentially universal method for the de novo solution of the crystal structures of membrane proteins via iodide–single-wavelength anomalous diffraction (I-SAD). The potential universality of the method is based on a common feature of membrane proteins—the availability a...

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Autores principales: Melnikov, Igor, Polovinkin, Vitaly, Kovalev, Kirill, Gushchin, Ivan, Shevtsov, Mikhail, Shevchenko, Vitaly, Mishin, Alexey, Alekseev, Alexey, Rodriguez-Valera, Francisco, Borshchevskiy, Valentin, Cherezov, Vadim, Leonard, Gordon A., Gordeliy, Valentin, Popov, Alexander
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Association for the Advancement of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5429034/
https://www.ncbi.nlm.nih.gov/pubmed/28508075
http://dx.doi.org/10.1126/sciadv.1602952
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author Melnikov, Igor
Polovinkin, Vitaly
Kovalev, Kirill
Gushchin, Ivan
Shevtsov, Mikhail
Shevchenko, Vitaly
Mishin, Alexey
Alekseev, Alexey
Rodriguez-Valera, Francisco
Borshchevskiy, Valentin
Cherezov, Vadim
Leonard, Gordon A.
Gordeliy, Valentin
Popov, Alexander
author_facet Melnikov, Igor
Polovinkin, Vitaly
Kovalev, Kirill
Gushchin, Ivan
Shevtsov, Mikhail
Shevchenko, Vitaly
Mishin, Alexey
Alekseev, Alexey
Rodriguez-Valera, Francisco
Borshchevskiy, Valentin
Cherezov, Vadim
Leonard, Gordon A.
Gordeliy, Valentin
Popov, Alexander
author_sort Melnikov, Igor
collection PubMed
description We describe a fast, easy, and potentially universal method for the de novo solution of the crystal structures of membrane proteins via iodide–single-wavelength anomalous diffraction (I-SAD). The potential universality of the method is based on a common feature of membrane proteins—the availability at the hydrophobic-hydrophilic interface of positively charged amino acid residues with which iodide strongly interacts. We demonstrate the solution using I-SAD of four crystal structures representing different classes of membrane proteins, including a human G protein–coupled receptor (GPCR), and we show that I-SAD can be applied using data collection strategies based on either standard or serial x-ray crystallography techniques.
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spelling pubmed-54290342017-05-15 Fast iodide-SAD phasing for high-throughput membrane protein structure determination Melnikov, Igor Polovinkin, Vitaly Kovalev, Kirill Gushchin, Ivan Shevtsov, Mikhail Shevchenko, Vitaly Mishin, Alexey Alekseev, Alexey Rodriguez-Valera, Francisco Borshchevskiy, Valentin Cherezov, Vadim Leonard, Gordon A. Gordeliy, Valentin Popov, Alexander Sci Adv Research Articles We describe a fast, easy, and potentially universal method for the de novo solution of the crystal structures of membrane proteins via iodide–single-wavelength anomalous diffraction (I-SAD). The potential universality of the method is based on a common feature of membrane proteins—the availability at the hydrophobic-hydrophilic interface of positively charged amino acid residues with which iodide strongly interacts. We demonstrate the solution using I-SAD of four crystal structures representing different classes of membrane proteins, including a human G protein–coupled receptor (GPCR), and we show that I-SAD can be applied using data collection strategies based on either standard or serial x-ray crystallography techniques. American Association for the Advancement of Science 2017-05-12 /pmc/articles/PMC5429034/ /pubmed/28508075 http://dx.doi.org/10.1126/sciadv.1602952 Text en Copyright © 2017, The Authors http://creativecommons.org/licenses/by-nc/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial license (http://creativecommons.org/licenses/by-nc/4.0/) , which permits use, distribution, and reproduction in any medium, so long as the resultant use is not for commercial advantage and provided the original work is properly cited.
spellingShingle Research Articles
Melnikov, Igor
Polovinkin, Vitaly
Kovalev, Kirill
Gushchin, Ivan
Shevtsov, Mikhail
Shevchenko, Vitaly
Mishin, Alexey
Alekseev, Alexey
Rodriguez-Valera, Francisco
Borshchevskiy, Valentin
Cherezov, Vadim
Leonard, Gordon A.
Gordeliy, Valentin
Popov, Alexander
Fast iodide-SAD phasing for high-throughput membrane protein structure determination
title Fast iodide-SAD phasing for high-throughput membrane protein structure determination
title_full Fast iodide-SAD phasing for high-throughput membrane protein structure determination
title_fullStr Fast iodide-SAD phasing for high-throughput membrane protein structure determination
title_full_unstemmed Fast iodide-SAD phasing for high-throughput membrane protein structure determination
title_short Fast iodide-SAD phasing for high-throughput membrane protein structure determination
title_sort fast iodide-sad phasing for high-throughput membrane protein structure determination
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5429034/
https://www.ncbi.nlm.nih.gov/pubmed/28508075
http://dx.doi.org/10.1126/sciadv.1602952
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