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Transcriptomic data of Arabidopsis thaliana hypocotyl upon suppression of expansin genes
Expansin is a cell wall loosening protein without hydrolytic activity, which allows cell expansion by influencing cell wall extensibility. Previous studies showed that the suppression of expansin genes (EXPA1, EXPA3, EXPA5 and EXPA10) resulted in defective organ growth and altered cell wall chemical...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5429223/ https://www.ncbi.nlm.nih.gov/pubmed/28529882 http://dx.doi.org/10.1016/j.gdata.2017.05.002 |
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author | Ilias, Iqmal Asyraf Airianah, Othman Babul Baharum, Syarul Nataqain Goh, Hoe-Han |
author_facet | Ilias, Iqmal Asyraf Airianah, Othman Babul Baharum, Syarul Nataqain Goh, Hoe-Han |
author_sort | Ilias, Iqmal Asyraf |
collection | PubMed |
description | Expansin is a cell wall loosening protein without hydrolytic activity, which allows cell expansion by influencing cell wall extensibility. Previous studies showed that the suppression of expansin genes (EXPA1, EXPA3, EXPA5 and EXPA10) resulted in defective organ growth and altered cell wall chemical composition [1,2]. However, the molecular mechanism on how the suppression of non-enzymatic expansin expression can result in widespread effects on plant cell wall and organ growth is still unclear. In this study, we performed transcriptomic analysis on the hypocotyls of previously reported transgenic Arabidopsis line [1] to investigate the effects of expansin gene suppression on the global gene expression pattern, particularly on the cell wall related genes. |
format | Online Article Text |
id | pubmed-5429223 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-54292232017-05-19 Transcriptomic data of Arabidopsis thaliana hypocotyl upon suppression of expansin genes Ilias, Iqmal Asyraf Airianah, Othman Babul Baharum, Syarul Nataqain Goh, Hoe-Han Genom Data Data in Brief Expansin is a cell wall loosening protein without hydrolytic activity, which allows cell expansion by influencing cell wall extensibility. Previous studies showed that the suppression of expansin genes (EXPA1, EXPA3, EXPA5 and EXPA10) resulted in defective organ growth and altered cell wall chemical composition [1,2]. However, the molecular mechanism on how the suppression of non-enzymatic expansin expression can result in widespread effects on plant cell wall and organ growth is still unclear. In this study, we performed transcriptomic analysis on the hypocotyls of previously reported transgenic Arabidopsis line [1] to investigate the effects of expansin gene suppression on the global gene expression pattern, particularly on the cell wall related genes. Elsevier 2017-05-03 /pmc/articles/PMC5429223/ /pubmed/28529882 http://dx.doi.org/10.1016/j.gdata.2017.05.002 Text en © 2017 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Data in Brief Ilias, Iqmal Asyraf Airianah, Othman Babul Baharum, Syarul Nataqain Goh, Hoe-Han Transcriptomic data of Arabidopsis thaliana hypocotyl upon suppression of expansin genes |
title | Transcriptomic data of Arabidopsis thaliana hypocotyl upon suppression of expansin genes |
title_full | Transcriptomic data of Arabidopsis thaliana hypocotyl upon suppression of expansin genes |
title_fullStr | Transcriptomic data of Arabidopsis thaliana hypocotyl upon suppression of expansin genes |
title_full_unstemmed | Transcriptomic data of Arabidopsis thaliana hypocotyl upon suppression of expansin genes |
title_short | Transcriptomic data of Arabidopsis thaliana hypocotyl upon suppression of expansin genes |
title_sort | transcriptomic data of arabidopsis thaliana hypocotyl upon suppression of expansin genes |
topic | Data in Brief |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5429223/ https://www.ncbi.nlm.nih.gov/pubmed/28529882 http://dx.doi.org/10.1016/j.gdata.2017.05.002 |
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