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Identification of microRNAs associated with glioma diagnosis and prognosis
The sensitivity and specificity of microRNAs (miRNAs) for diagnosing glioma are controversial. We therefore performed a meta-analysis to systematically identify glioma-associated miRNAs. We initially screened five miRNA microarray datasets to evaluate the differential expression of miRNAs between gl...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5432266/ https://www.ncbi.nlm.nih.gov/pubmed/28060761 http://dx.doi.org/10.18632/oncotarget.14445 |
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author | Ye, Xinyun Wei, Wenjin Zhang, Zhengyu He, Chunming Yang, Ruijin Zhang, Jinshi Wu, Zhiwu Huang, Qianliang Jiang, Qiuhua |
author_facet | Ye, Xinyun Wei, Wenjin Zhang, Zhengyu He, Chunming Yang, Ruijin Zhang, Jinshi Wu, Zhiwu Huang, Qianliang Jiang, Qiuhua |
author_sort | Ye, Xinyun |
collection | PubMed |
description | The sensitivity and specificity of microRNAs (miRNAs) for diagnosing glioma are controversial. We therefore performed a meta-analysis to systematically identify glioma-associated miRNAs. We initially screened five miRNA microarray datasets to evaluate the differential expression of miRNAs between glioma and normal tissues. We next compared the expression of the miRNAs in different organs and tissues to assess the sensitivity and specificity of the differentially expressed miRNAs in the diagnosis of glioma. Finally, pathway analysis was performed using GeneGO. We identified 27 candidate miRNAs associated with glioma initiation, progression, and patient prognosis. Sensitivity and specificity analysis indicated miR-15a, miR-16, miR-21, miR-23a, and miR-9 were up-regulated, while miR-124 was down-regulated in glioma. Ten signaling pathways showed the strongest association with glioma development and progression: the p53 pathway feedback loops 2, Interleukin signaling pathway, Toll receptor signaling pathway, Parkinson's disease, Notch signaling pathway, Cadherin signaling pathway, Apoptosis signaling pathway, VEGF signaling pathway, Alzheimer disease-amyloid secretase pathway, and the FGF signaling pathway. Our results indicate that the integration of miRNA, gene, and protein expression data can yield valuable biomarkers for glioma diagnosis and treatment. Indeed, six of the miRNAs identified in this study may be useful diagnostic and prognostic biomarkers in glioma. |
format | Online Article Text |
id | pubmed-5432266 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-54322662017-05-17 Identification of microRNAs associated with glioma diagnosis and prognosis Ye, Xinyun Wei, Wenjin Zhang, Zhengyu He, Chunming Yang, Ruijin Zhang, Jinshi Wu, Zhiwu Huang, Qianliang Jiang, Qiuhua Oncotarget Research Paper The sensitivity and specificity of microRNAs (miRNAs) for diagnosing glioma are controversial. We therefore performed a meta-analysis to systematically identify glioma-associated miRNAs. We initially screened five miRNA microarray datasets to evaluate the differential expression of miRNAs between glioma and normal tissues. We next compared the expression of the miRNAs in different organs and tissues to assess the sensitivity and specificity of the differentially expressed miRNAs in the diagnosis of glioma. Finally, pathway analysis was performed using GeneGO. We identified 27 candidate miRNAs associated with glioma initiation, progression, and patient prognosis. Sensitivity and specificity analysis indicated miR-15a, miR-16, miR-21, miR-23a, and miR-9 were up-regulated, while miR-124 was down-regulated in glioma. Ten signaling pathways showed the strongest association with glioma development and progression: the p53 pathway feedback loops 2, Interleukin signaling pathway, Toll receptor signaling pathway, Parkinson's disease, Notch signaling pathway, Cadherin signaling pathway, Apoptosis signaling pathway, VEGF signaling pathway, Alzheimer disease-amyloid secretase pathway, and the FGF signaling pathway. Our results indicate that the integration of miRNA, gene, and protein expression data can yield valuable biomarkers for glioma diagnosis and treatment. Indeed, six of the miRNAs identified in this study may be useful diagnostic and prognostic biomarkers in glioma. Impact Journals LLC 2017-01-02 /pmc/articles/PMC5432266/ /pubmed/28060761 http://dx.doi.org/10.18632/oncotarget.14445 Text en Copyright: © 2017 Ye et al. http://creativecommons.org/licenses/by/3.0/ This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) (CC-BY), which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Research Paper Ye, Xinyun Wei, Wenjin Zhang, Zhengyu He, Chunming Yang, Ruijin Zhang, Jinshi Wu, Zhiwu Huang, Qianliang Jiang, Qiuhua Identification of microRNAs associated with glioma diagnosis and prognosis |
title | Identification of microRNAs associated with glioma diagnosis and prognosis |
title_full | Identification of microRNAs associated with glioma diagnosis and prognosis |
title_fullStr | Identification of microRNAs associated with glioma diagnosis and prognosis |
title_full_unstemmed | Identification of microRNAs associated with glioma diagnosis and prognosis |
title_short | Identification of microRNAs associated with glioma diagnosis and prognosis |
title_sort | identification of micrornas associated with glioma diagnosis and prognosis |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5432266/ https://www.ncbi.nlm.nih.gov/pubmed/28060761 http://dx.doi.org/10.18632/oncotarget.14445 |
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