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Comparative genomic analysis reveals genetic features related to the virulence of Bacillus cereus FORC_013
BACKGROUND: Bacillus cereus is well known as a gastrointestinal pathogen that causes food-borne illness. In the present study, we sequenced the complete genome of B. cereus FORC_013 isolated from fried eel in South Korea. To extend our understanding of the genomic characteristics of FORC_013, we con...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5433235/ https://www.ncbi.nlm.nih.gov/pubmed/28515790 http://dx.doi.org/10.1186/s13099-017-0175-z |
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author | Koo, Hyun-Jin Ahn, Sojin Chung, Han Young Kim, Suyeon Kim, Kwondo Ryu, Sangryeol Lee, Ju-Hoon Choi, Sang Ho Kim, Heebal |
author_facet | Koo, Hyun-Jin Ahn, Sojin Chung, Han Young Kim, Suyeon Kim, Kwondo Ryu, Sangryeol Lee, Ju-Hoon Choi, Sang Ho Kim, Heebal |
author_sort | Koo, Hyun-Jin |
collection | PubMed |
description | BACKGROUND: Bacillus cereus is well known as a gastrointestinal pathogen that causes food-borne illness. In the present study, we sequenced the complete genome of B. cereus FORC_013 isolated from fried eel in South Korea. To extend our understanding of the genomic characteristics of FORC_013, we conducted a comparative analysis with the published genomes of other B. cereus strains. RESULTS: We fully assembled the single circular chromosome (5,418,913 bp) and one plasmid (259,749 bp); 5511 open reading frames (ORFs) and 283 ORFs were predicted for the chromosome and plasmid, respectively. Moreover, we detected that the enterotoxin (NHE, HBL, CytK) induces food-borne illness with diarrheal symptom, and that the pleiotropic regulator, along with other virulence factors, plays a role in surviving and biofilm formation. Through comparative analysis using the complete genome sequence of B. cereus FORC_013, we identified both positively selected genes related to virulence regulation and 224 strain-specific genes of FORC_013. CONCLUSIONS: Through genome analysis of B. cereus FORC_013, we identified multiple virulence factors that may contribute to pathogenicity. These results will provide insight into further studies regarding B. cereus pathogenesis mechanism at the genomic level. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13099-017-0175-z) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5433235 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-54332352017-05-17 Comparative genomic analysis reveals genetic features related to the virulence of Bacillus cereus FORC_013 Koo, Hyun-Jin Ahn, Sojin Chung, Han Young Kim, Suyeon Kim, Kwondo Ryu, Sangryeol Lee, Ju-Hoon Choi, Sang Ho Kim, Heebal Gut Pathog Genome Report BACKGROUND: Bacillus cereus is well known as a gastrointestinal pathogen that causes food-borne illness. In the present study, we sequenced the complete genome of B. cereus FORC_013 isolated from fried eel in South Korea. To extend our understanding of the genomic characteristics of FORC_013, we conducted a comparative analysis with the published genomes of other B. cereus strains. RESULTS: We fully assembled the single circular chromosome (5,418,913 bp) and one plasmid (259,749 bp); 5511 open reading frames (ORFs) and 283 ORFs were predicted for the chromosome and plasmid, respectively. Moreover, we detected that the enterotoxin (NHE, HBL, CytK) induces food-borne illness with diarrheal symptom, and that the pleiotropic regulator, along with other virulence factors, plays a role in surviving and biofilm formation. Through comparative analysis using the complete genome sequence of B. cereus FORC_013, we identified both positively selected genes related to virulence regulation and 224 strain-specific genes of FORC_013. CONCLUSIONS: Through genome analysis of B. cereus FORC_013, we identified multiple virulence factors that may contribute to pathogenicity. These results will provide insight into further studies regarding B. cereus pathogenesis mechanism at the genomic level. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13099-017-0175-z) contains supplementary material, which is available to authorized users. BioMed Central 2017-05-15 /pmc/articles/PMC5433235/ /pubmed/28515790 http://dx.doi.org/10.1186/s13099-017-0175-z Text en © The Author(s) 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Genome Report Koo, Hyun-Jin Ahn, Sojin Chung, Han Young Kim, Suyeon Kim, Kwondo Ryu, Sangryeol Lee, Ju-Hoon Choi, Sang Ho Kim, Heebal Comparative genomic analysis reveals genetic features related to the virulence of Bacillus cereus FORC_013 |
title | Comparative genomic analysis reveals genetic features related to the virulence of Bacillus cereus FORC_013 |
title_full | Comparative genomic analysis reveals genetic features related to the virulence of Bacillus cereus FORC_013 |
title_fullStr | Comparative genomic analysis reveals genetic features related to the virulence of Bacillus cereus FORC_013 |
title_full_unstemmed | Comparative genomic analysis reveals genetic features related to the virulence of Bacillus cereus FORC_013 |
title_short | Comparative genomic analysis reveals genetic features related to the virulence of Bacillus cereus FORC_013 |
title_sort | comparative genomic analysis reveals genetic features related to the virulence of bacillus cereus forc_013 |
topic | Genome Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5433235/ https://www.ncbi.nlm.nih.gov/pubmed/28515790 http://dx.doi.org/10.1186/s13099-017-0175-z |
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