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Quantum chemical calculations of tryptophan → heme electron and excitation energy transfer rates in myoglobin

The development of optical multidimensional spectroscopic techniques has opened up new possibilities for the study of biological processes. Recently, ultrafast two‐dimensional ultraviolet spectroscopy experiments have determined the rates of tryptophan → heme electron transfer and excitation energy...

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Detalles Bibliográficos
Autores principales: Suess, Christian J., Hirst, Jonathan D., Besley, Nicholas A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5434924/
https://www.ncbi.nlm.nih.gov/pubmed/28369976
http://dx.doi.org/10.1002/jcc.24793
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author Suess, Christian J.
Hirst, Jonathan D.
Besley, Nicholas A.
author_facet Suess, Christian J.
Hirst, Jonathan D.
Besley, Nicholas A.
author_sort Suess, Christian J.
collection PubMed
description The development of optical multidimensional spectroscopic techniques has opened up new possibilities for the study of biological processes. Recently, ultrafast two‐dimensional ultraviolet spectroscopy experiments have determined the rates of tryptophan → heme electron transfer and excitation energy transfer for the two tryptophan residues in myoglobin (Consani et al., Science, 2013, 339, 1586). Here, we show that accurate prediction of these rates can be achieved using Marcus theory in conjunction with time‐dependent density functional theory. Key intermediate residues between the donor and acceptor are identified, and in particular the residues Val68 and Ile75 play a critical role in calculations of the electron coupling matrix elements. Our calculations demonstrate how small changes in structure can have a large effect on the rates, and show that the different rates of electron transfer are dictated by the distance between the heme and tryptophan residues, while for excitation energy transfer the orientation of the tryptophan residues relative to the heme is important. © 2017 The Authors. Journal of Computational Chemistry Published by Wiley Periodicals, Inc.
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spelling pubmed-54349242017-06-01 Quantum chemical calculations of tryptophan → heme electron and excitation energy transfer rates in myoglobin Suess, Christian J. Hirst, Jonathan D. Besley, Nicholas A. J Comput Chem Full Papers The development of optical multidimensional spectroscopic techniques has opened up new possibilities for the study of biological processes. Recently, ultrafast two‐dimensional ultraviolet spectroscopy experiments have determined the rates of tryptophan → heme electron transfer and excitation energy transfer for the two tryptophan residues in myoglobin (Consani et al., Science, 2013, 339, 1586). Here, we show that accurate prediction of these rates can be achieved using Marcus theory in conjunction with time‐dependent density functional theory. Key intermediate residues between the donor and acceptor are identified, and in particular the residues Val68 and Ile75 play a critical role in calculations of the electron coupling matrix elements. Our calculations demonstrate how small changes in structure can have a large effect on the rates, and show that the different rates of electron transfer are dictated by the distance between the heme and tryptophan residues, while for excitation energy transfer the orientation of the tryptophan residues relative to the heme is important. © 2017 The Authors. Journal of Computational Chemistry Published by Wiley Periodicals, Inc. John Wiley and Sons Inc. 2017-04-01 2017-06-30 /pmc/articles/PMC5434924/ /pubmed/28369976 http://dx.doi.org/10.1002/jcc.24793 Text en © 2017 The Authors. Journal of Computational Chemistry Published by Wiley Periodicals, Inc. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Full Papers
Suess, Christian J.
Hirst, Jonathan D.
Besley, Nicholas A.
Quantum chemical calculations of tryptophan → heme electron and excitation energy transfer rates in myoglobin
title Quantum chemical calculations of tryptophan → heme electron and excitation energy transfer rates in myoglobin
title_full Quantum chemical calculations of tryptophan → heme electron and excitation energy transfer rates in myoglobin
title_fullStr Quantum chemical calculations of tryptophan → heme electron and excitation energy transfer rates in myoglobin
title_full_unstemmed Quantum chemical calculations of tryptophan → heme electron and excitation energy transfer rates in myoglobin
title_short Quantum chemical calculations of tryptophan → heme electron and excitation energy transfer rates in myoglobin
title_sort quantum chemical calculations of tryptophan → heme electron and excitation energy transfer rates in myoglobin
topic Full Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5434924/
https://www.ncbi.nlm.nih.gov/pubmed/28369976
http://dx.doi.org/10.1002/jcc.24793
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