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A Downmodulated MicroRNA Profiling in Patients with Gastric Cancer
Objective. Here, we aim to investigate the microRNA (miR) profiling in human gastric cancer (GC). Methods. Tumoral and matched peritumoral gastric specimens were collected from 12 GC patients who underwent routine surgery. A high-throughput miR sequencing method was applied to detect the aberrantly...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5436063/ https://www.ncbi.nlm.nih.gov/pubmed/28546810 http://dx.doi.org/10.1155/2017/1526981 |
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author | Zhang, Tao Liu, Chang Huang, Shi Ma, Yuanping Fang, Jiansong Chen, Yuanneng |
author_facet | Zhang, Tao Liu, Chang Huang, Shi Ma, Yuanping Fang, Jiansong Chen, Yuanneng |
author_sort | Zhang, Tao |
collection | PubMed |
description | Objective. Here, we aim to investigate the microRNA (miR) profiling in human gastric cancer (GC). Methods. Tumoral and matched peritumoral gastric specimens were collected from 12 GC patients who underwent routine surgery. A high-throughput miR sequencing method was applied to detect the aberrantly expressed miRs in a subset of 6 paired samples. The stem-loop quantitative real-time polymerase chain reaction (qRT-PCR) assay was subsequently performed to confirm the sequencing results in the remaining 6 paired samples. The profiling results were also validated in vitro in three human GC cell lines (BGC-823, MGC-803, and GTL-16) and a normal gastric epithelial cell line (GES-1). Results. The miR sequencing approach detected 5 differentially expressed miRs, hsa-miR-132-3p, hsa-miR-155-5p, hsa-miR-19b-3p, hsa-miR-204-5p, and hsa-miR-30a-3p, which were significantly downmodulated between the tumoral and peritumoral GC tissues. Most of the results were further confirmed by qRT-PCR, while no change was observed for hsa-miR-30a-3p. The in vitro finding also agreed with the results of both miR sequencing and qRT-PCR for hsa-miR-204-5p, hsa-miR-155-5p, and hsa-miR-132-3p. Conclusion. Together, our findings may serve to identify new molecular alterations as well as to enrich the miR profiling in human GC. |
format | Online Article Text |
id | pubmed-5436063 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-54360632017-05-25 A Downmodulated MicroRNA Profiling in Patients with Gastric Cancer Zhang, Tao Liu, Chang Huang, Shi Ma, Yuanping Fang, Jiansong Chen, Yuanneng Gastroenterol Res Pract Research Article Objective. Here, we aim to investigate the microRNA (miR) profiling in human gastric cancer (GC). Methods. Tumoral and matched peritumoral gastric specimens were collected from 12 GC patients who underwent routine surgery. A high-throughput miR sequencing method was applied to detect the aberrantly expressed miRs in a subset of 6 paired samples. The stem-loop quantitative real-time polymerase chain reaction (qRT-PCR) assay was subsequently performed to confirm the sequencing results in the remaining 6 paired samples. The profiling results were also validated in vitro in three human GC cell lines (BGC-823, MGC-803, and GTL-16) and a normal gastric epithelial cell line (GES-1). Results. The miR sequencing approach detected 5 differentially expressed miRs, hsa-miR-132-3p, hsa-miR-155-5p, hsa-miR-19b-3p, hsa-miR-204-5p, and hsa-miR-30a-3p, which were significantly downmodulated between the tumoral and peritumoral GC tissues. Most of the results were further confirmed by qRT-PCR, while no change was observed for hsa-miR-30a-3p. The in vitro finding also agreed with the results of both miR sequencing and qRT-PCR for hsa-miR-204-5p, hsa-miR-155-5p, and hsa-miR-132-3p. Conclusion. Together, our findings may serve to identify new molecular alterations as well as to enrich the miR profiling in human GC. Hindawi 2017 2017-05-04 /pmc/articles/PMC5436063/ /pubmed/28546810 http://dx.doi.org/10.1155/2017/1526981 Text en Copyright © 2017 Tao Zhang et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Zhang, Tao Liu, Chang Huang, Shi Ma, Yuanping Fang, Jiansong Chen, Yuanneng A Downmodulated MicroRNA Profiling in Patients with Gastric Cancer |
title | A Downmodulated MicroRNA Profiling in Patients with Gastric Cancer |
title_full | A Downmodulated MicroRNA Profiling in Patients with Gastric Cancer |
title_fullStr | A Downmodulated MicroRNA Profiling in Patients with Gastric Cancer |
title_full_unstemmed | A Downmodulated MicroRNA Profiling in Patients with Gastric Cancer |
title_short | A Downmodulated MicroRNA Profiling in Patients with Gastric Cancer |
title_sort | downmodulated microrna profiling in patients with gastric cancer |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5436063/ https://www.ncbi.nlm.nih.gov/pubmed/28546810 http://dx.doi.org/10.1155/2017/1526981 |
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