Cargando…

A Downmodulated MicroRNA Profiling in Patients with Gastric Cancer

Objective. Here, we aim to investigate the microRNA (miR) profiling in human gastric cancer (GC). Methods. Tumoral and matched peritumoral gastric specimens were collected from 12 GC patients who underwent routine surgery. A high-throughput miR sequencing method was applied to detect the aberrantly...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Tao, Liu, Chang, Huang, Shi, Ma, Yuanping, Fang, Jiansong, Chen, Yuanneng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5436063/
https://www.ncbi.nlm.nih.gov/pubmed/28546810
http://dx.doi.org/10.1155/2017/1526981
_version_ 1783237332624736256
author Zhang, Tao
Liu, Chang
Huang, Shi
Ma, Yuanping
Fang, Jiansong
Chen, Yuanneng
author_facet Zhang, Tao
Liu, Chang
Huang, Shi
Ma, Yuanping
Fang, Jiansong
Chen, Yuanneng
author_sort Zhang, Tao
collection PubMed
description Objective. Here, we aim to investigate the microRNA (miR) profiling in human gastric cancer (GC). Methods. Tumoral and matched peritumoral gastric specimens were collected from 12 GC patients who underwent routine surgery. A high-throughput miR sequencing method was applied to detect the aberrantly expressed miRs in a subset of 6 paired samples. The stem-loop quantitative real-time polymerase chain reaction (qRT-PCR) assay was subsequently performed to confirm the sequencing results in the remaining 6 paired samples. The profiling results were also validated in vitro in three human GC cell lines (BGC-823, MGC-803, and GTL-16) and a normal gastric epithelial cell line (GES-1). Results. The miR sequencing approach detected 5 differentially expressed miRs, hsa-miR-132-3p, hsa-miR-155-5p, hsa-miR-19b-3p, hsa-miR-204-5p, and hsa-miR-30a-3p, which were significantly downmodulated between the tumoral and peritumoral GC tissues. Most of the results were further confirmed by qRT-PCR, while no change was observed for hsa-miR-30a-3p. The in vitro finding also agreed with the results of both miR sequencing and qRT-PCR for hsa-miR-204-5p, hsa-miR-155-5p, and hsa-miR-132-3p. Conclusion. Together, our findings may serve to identify new molecular alterations as well as to enrich the miR profiling in human GC.
format Online
Article
Text
id pubmed-5436063
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-54360632017-05-25 A Downmodulated MicroRNA Profiling in Patients with Gastric Cancer Zhang, Tao Liu, Chang Huang, Shi Ma, Yuanping Fang, Jiansong Chen, Yuanneng Gastroenterol Res Pract Research Article Objective. Here, we aim to investigate the microRNA (miR) profiling in human gastric cancer (GC). Methods. Tumoral and matched peritumoral gastric specimens were collected from 12 GC patients who underwent routine surgery. A high-throughput miR sequencing method was applied to detect the aberrantly expressed miRs in a subset of 6 paired samples. The stem-loop quantitative real-time polymerase chain reaction (qRT-PCR) assay was subsequently performed to confirm the sequencing results in the remaining 6 paired samples. The profiling results were also validated in vitro in three human GC cell lines (BGC-823, MGC-803, and GTL-16) and a normal gastric epithelial cell line (GES-1). Results. The miR sequencing approach detected 5 differentially expressed miRs, hsa-miR-132-3p, hsa-miR-155-5p, hsa-miR-19b-3p, hsa-miR-204-5p, and hsa-miR-30a-3p, which were significantly downmodulated between the tumoral and peritumoral GC tissues. Most of the results were further confirmed by qRT-PCR, while no change was observed for hsa-miR-30a-3p. The in vitro finding also agreed with the results of both miR sequencing and qRT-PCR for hsa-miR-204-5p, hsa-miR-155-5p, and hsa-miR-132-3p. Conclusion. Together, our findings may serve to identify new molecular alterations as well as to enrich the miR profiling in human GC. Hindawi 2017 2017-05-04 /pmc/articles/PMC5436063/ /pubmed/28546810 http://dx.doi.org/10.1155/2017/1526981 Text en Copyright © 2017 Tao Zhang et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Zhang, Tao
Liu, Chang
Huang, Shi
Ma, Yuanping
Fang, Jiansong
Chen, Yuanneng
A Downmodulated MicroRNA Profiling in Patients with Gastric Cancer
title A Downmodulated MicroRNA Profiling in Patients with Gastric Cancer
title_full A Downmodulated MicroRNA Profiling in Patients with Gastric Cancer
title_fullStr A Downmodulated MicroRNA Profiling in Patients with Gastric Cancer
title_full_unstemmed A Downmodulated MicroRNA Profiling in Patients with Gastric Cancer
title_short A Downmodulated MicroRNA Profiling in Patients with Gastric Cancer
title_sort downmodulated microrna profiling in patients with gastric cancer
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5436063/
https://www.ncbi.nlm.nih.gov/pubmed/28546810
http://dx.doi.org/10.1155/2017/1526981
work_keys_str_mv AT zhangtao adownmodulatedmicrornaprofilinginpatientswithgastriccancer
AT liuchang adownmodulatedmicrornaprofilinginpatientswithgastriccancer
AT huangshi adownmodulatedmicrornaprofilinginpatientswithgastriccancer
AT mayuanping adownmodulatedmicrornaprofilinginpatientswithgastriccancer
AT fangjiansong adownmodulatedmicrornaprofilinginpatientswithgastriccancer
AT chenyuanneng adownmodulatedmicrornaprofilinginpatientswithgastriccancer
AT zhangtao downmodulatedmicrornaprofilinginpatientswithgastriccancer
AT liuchang downmodulatedmicrornaprofilinginpatientswithgastriccancer
AT huangshi downmodulatedmicrornaprofilinginpatientswithgastriccancer
AT mayuanping downmodulatedmicrornaprofilinginpatientswithgastriccancer
AT fangjiansong downmodulatedmicrornaprofilinginpatientswithgastriccancer
AT chenyuanneng downmodulatedmicrornaprofilinginpatientswithgastriccancer