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Evaluation of the BioFire(®) FilmArray(®) Blood Culture Identification Panel on positive blood cultures in a regional hospital laboratory in KwaZulu-Natal

BACKGROUND: There are presently many non-culture-based methods commercially available to identify organisms and antimicrobial susceptibility from blood culture bottles. Each platform has its benefits and limitations. However, there is a need for an improved system with minimal hands-on requirements...

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Autores principales: Fhooblall, Mokshanand, Nkwanyana, Fikile, Mlisana, Koleka P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AOSIS 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5436403/
https://www.ncbi.nlm.nih.gov/pubmed/28879113
http://dx.doi.org/10.4102/ajlm.v5i1.411
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author Fhooblall, Mokshanand
Nkwanyana, Fikile
Mlisana, Koleka P.
author_facet Fhooblall, Mokshanand
Nkwanyana, Fikile
Mlisana, Koleka P.
author_sort Fhooblall, Mokshanand
collection PubMed
description BACKGROUND: There are presently many non-culture-based methods commercially available to identify organisms and antimicrobial susceptibility from blood culture bottles. Each platform has its benefits and limitations. However, there is a need for an improved system with minimal hands-on requirements and short run times. OBJECTIVES: In this study, the performance characteristics of the FilmArray(®) BCID Panel kit were evaluated to assess the efficiency of the kit against an existing system used for identification and antimicrobial susceptibility of organisms from blood cultures. METHODS: Positive blood cultures that had initially been received from hospitalised patients of a large quaternary referral hospital in Durban, South Africa were processed as per routine protocol at its Medical Microbiology Laboratory. Positive blood cultures were processed on the FilmArray BCID Panel kit in parallel with the routine sample processing. Inferences were then drawn from results obtained. RESULTS: Organism detection by the FilmArray BCID panel was accurate at 92.6% when organisms that were on the repertoire of the kit were considered, compared to the combination methods (reference method used in the study laboratory). Detection of the antimicrobial resistance markers provided by the panel and reference method demonstrated 100% consistency. Blood cultures with a single organism were accurately identified at 93.8% by FilmArray, while blood cultures with more than one organism were identified at 85.7%. CONCLUSION: The FilmArray BCID Panel kit is valuable for detection of organisms and markers of antibiotic resistance for an extensive range of organisms.
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spelling pubmed-54364032017-09-06 Evaluation of the BioFire(®) FilmArray(®) Blood Culture Identification Panel on positive blood cultures in a regional hospital laboratory in KwaZulu-Natal Fhooblall, Mokshanand Nkwanyana, Fikile Mlisana, Koleka P. Afr J Lab Med Original Research BACKGROUND: There are presently many non-culture-based methods commercially available to identify organisms and antimicrobial susceptibility from blood culture bottles. Each platform has its benefits and limitations. However, there is a need for an improved system with minimal hands-on requirements and short run times. OBJECTIVES: In this study, the performance characteristics of the FilmArray(®) BCID Panel kit were evaluated to assess the efficiency of the kit against an existing system used for identification and antimicrobial susceptibility of organisms from blood cultures. METHODS: Positive blood cultures that had initially been received from hospitalised patients of a large quaternary referral hospital in Durban, South Africa were processed as per routine protocol at its Medical Microbiology Laboratory. Positive blood cultures were processed on the FilmArray BCID Panel kit in parallel with the routine sample processing. Inferences were then drawn from results obtained. RESULTS: Organism detection by the FilmArray BCID panel was accurate at 92.6% when organisms that were on the repertoire of the kit were considered, compared to the combination methods (reference method used in the study laboratory). Detection of the antimicrobial resistance markers provided by the panel and reference method demonstrated 100% consistency. Blood cultures with a single organism were accurately identified at 93.8% by FilmArray, while blood cultures with more than one organism were identified at 85.7%. CONCLUSION: The FilmArray BCID Panel kit is valuable for detection of organisms and markers of antibiotic resistance for an extensive range of organisms. AOSIS 2016-09-30 /pmc/articles/PMC5436403/ /pubmed/28879113 http://dx.doi.org/10.4102/ajlm.v5i1.411 Text en © 2016. The Authors http://creativecommons.org/licenses/by/2.0/ Licensee: AOSIS. This work is licensed under the Creative Commons Attribution License.
spellingShingle Original Research
Fhooblall, Mokshanand
Nkwanyana, Fikile
Mlisana, Koleka P.
Evaluation of the BioFire(®) FilmArray(®) Blood Culture Identification Panel on positive blood cultures in a regional hospital laboratory in KwaZulu-Natal
title Evaluation of the BioFire(®) FilmArray(®) Blood Culture Identification Panel on positive blood cultures in a regional hospital laboratory in KwaZulu-Natal
title_full Evaluation of the BioFire(®) FilmArray(®) Blood Culture Identification Panel on positive blood cultures in a regional hospital laboratory in KwaZulu-Natal
title_fullStr Evaluation of the BioFire(®) FilmArray(®) Blood Culture Identification Panel on positive blood cultures in a regional hospital laboratory in KwaZulu-Natal
title_full_unstemmed Evaluation of the BioFire(®) FilmArray(®) Blood Culture Identification Panel on positive blood cultures in a regional hospital laboratory in KwaZulu-Natal
title_short Evaluation of the BioFire(®) FilmArray(®) Blood Culture Identification Panel on positive blood cultures in a regional hospital laboratory in KwaZulu-Natal
title_sort evaluation of the biofire(®) filmarray(®) blood culture identification panel on positive blood cultures in a regional hospital laboratory in kwazulu-natal
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5436403/
https://www.ncbi.nlm.nih.gov/pubmed/28879113
http://dx.doi.org/10.4102/ajlm.v5i1.411
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