Draft Genome Sequence of Roseovarius sp. A-2, an Iodide-Oxidizing Bacterium Isolated from Natural Gas Brine Water, Chiba, Japan

Roseovarius sp. A-2 is a heterotrophic iodide (I(-))-oxidizing bacterium isolated from iodide-rich natural gas brine water in Chiba, Japan. This strain oxidizes iodide to molecular iodine (I(2)) by means of an extracellular multicopper oxidase. Here we report the draft genome sequence of strain A-2....

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Autores principales: Yuliana, Tri, Nakajima, Nobuyoshi, Yamamura, Shigeki, Tomita, Masaru, Suzuki, Haruo, Amachi, Seigo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Ivyspring International Publisher 2017
Materias:
Short Research Communication
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5436463/
https://www.ncbi.nlm.nih.gov/pubmed/28529651
http://dx.doi.org/10.7150/jgen.19846
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author Yuliana, Tri
Nakajima, Nobuyoshi
Yamamura, Shigeki
Tomita, Masaru
Suzuki, Haruo
Amachi, Seigo
author_facet Yuliana, Tri
Nakajima, Nobuyoshi
Yamamura, Shigeki
Tomita, Masaru
Suzuki, Haruo
Amachi, Seigo
author_sort Yuliana, Tri
collection PubMed
description Roseovarius sp. A-2 is a heterotrophic iodide (I(-))-oxidizing bacterium isolated from iodide-rich natural gas brine water in Chiba, Japan. This strain oxidizes iodide to molecular iodine (I(2)) by means of an extracellular multicopper oxidase. Here we report the draft genome sequence of strain A-2. The draft genome contained 46 tRNA genes, 1 copy of a 16S-23S-5S rRNA operon, and 4,514 protein coding DNA sequences, of which 1,207 (27%) were hypothetical proteins. The genome contained a gene encoding IoxA, a multicopper oxidase previously found to catalyze the oxidation of iodide in Iodidimonas sp. Q-1. This draft genome provides detailed insights into the metabolism and potential application of Roseovarius sp. A-2.
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spelling pubmed-54364632017-05-19 Draft Genome Sequence of Roseovarius sp. A-2, an Iodide-Oxidizing Bacterium Isolated from Natural Gas Brine Water, Chiba, Japan Yuliana, Tri Nakajima, Nobuyoshi Yamamura, Shigeki Tomita, Masaru Suzuki, Haruo Amachi, Seigo J Genomics Short Research Communication Roseovarius sp. A-2 is a heterotrophic iodide (I(-))-oxidizing bacterium isolated from iodide-rich natural gas brine water in Chiba, Japan. This strain oxidizes iodide to molecular iodine (I(2)) by means of an extracellular multicopper oxidase. Here we report the draft genome sequence of strain A-2. The draft genome contained 46 tRNA genes, 1 copy of a 16S-23S-5S rRNA operon, and 4,514 protein coding DNA sequences, of which 1,207 (27%) were hypothetical proteins. The genome contained a gene encoding IoxA, a multicopper oxidase previously found to catalyze the oxidation of iodide in Iodidimonas sp. Q-1. This draft genome provides detailed insights into the metabolism and potential application of Roseovarius sp. A-2. Ivyspring International Publisher 2017-04-06 /pmc/articles/PMC5436463/ /pubmed/28529651 http://dx.doi.org/10.7150/jgen.19846 Text en © Ivyspring International Publisher This is an open access article distributed under the terms of the Creative Commons Attribution (CC BY-NC) license (https://creativecommons.org/licenses/by-nc/4.0/). See http://ivyspring.com/terms for full terms and conditions.
spellingShingle Short Research Communication
Yuliana, Tri
Nakajima, Nobuyoshi
Yamamura, Shigeki
Tomita, Masaru
Suzuki, Haruo
Amachi, Seigo
Draft Genome Sequence of Roseovarius sp. A-2, an Iodide-Oxidizing Bacterium Isolated from Natural Gas Brine Water, Chiba, Japan
title Draft Genome Sequence of Roseovarius sp. A-2, an Iodide-Oxidizing Bacterium Isolated from Natural Gas Brine Water, Chiba, Japan
title_full Draft Genome Sequence of Roseovarius sp. A-2, an Iodide-Oxidizing Bacterium Isolated from Natural Gas Brine Water, Chiba, Japan
title_fullStr Draft Genome Sequence of Roseovarius sp. A-2, an Iodide-Oxidizing Bacterium Isolated from Natural Gas Brine Water, Chiba, Japan
title_full_unstemmed Draft Genome Sequence of Roseovarius sp. A-2, an Iodide-Oxidizing Bacterium Isolated from Natural Gas Brine Water, Chiba, Japan
title_short Draft Genome Sequence of Roseovarius sp. A-2, an Iodide-Oxidizing Bacterium Isolated from Natural Gas Brine Water, Chiba, Japan
title_sort draft genome sequence of roseovarius sp. a-2, an iodide-oxidizing bacterium isolated from natural gas brine water, chiba, japan
topic Short Research Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5436463/
https://www.ncbi.nlm.nih.gov/pubmed/28529651
http://dx.doi.org/10.7150/jgen.19846
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