Cargando…

Genome-wide association study for feed efficiency and growth traits in U.S. beef cattle

BACKGROUND: Single nucleotide polymorphism (SNP) arrays for domestic cattle have catalyzed the identification of genetic markers associated with complex traits for inclusion in modern breeding and selection programs. Using actual and imputed Illumina 778K genotypes for 3887 U.S. beef cattle from 3 p...

Descripción completa

Detalles Bibliográficos
Autores principales:	Seabury, Christopher M., Oldeschulte, David L., Saatchi, Mahdi, Beever, Jonathan E., Decker, Jared E., Halley, Yvette A., Bhattarai, Eric K., Molaei, Maral, Freetly, Harvey C., Hansen, Stephanie L., Yampara-Iquise, Helen, Johnson, Kristen A., Kerley, Monty S., Kim, JaeWoo, Loy, Daniel D., Marques, Elisa, Neibergs, Holly L., Schnabel, Robert D., Shike, Daniel W., Spangler, Matthew L., Weaber, Robert L., Garrick, Dorian J., Taylor, Jeremy F.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2017
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5437562/ https://www.ncbi.nlm.nih.gov/pubmed/28521758 http://dx.doi.org/10.1186/s12864-017-3754-y

Ejemplares similares

QTLs associated with dry matter intake, metabolic mid-test weight, growth and feed efficiency have little overlap across 4 beef cattle studies
por: Saatchi, Mahdi, et al.
Publicado: (2014)

QTL-mapping and genomic prediction for bovine respiratory disease in U.S. Holsteins using sequence imputation and feature selection
por: Hoff, Jesse L., et al.
Publicado: (2019)

Impact of reduced marker set estimation of genomic relationship matrices on genomic selection for feed efficiency in Angus cattle
por: Rolf, Megan M, et al.
Publicado: (2010)

Genome-wide association and genotype by environment interactions for growth traits in U.S. Gelbvieh cattle
por: Smith, Johanna L., et al.
Publicado: (2019)

Comparison of Bayesian models to estimate direct genomic values in multi-breed commercial beef cattle
por: Rolf, Megan M, et al.
Publicado: (2015)

Development of a genetic evaluation for hair shedding in American Angus cattle to improve thermotolerance
por: Durbin, Harly J., et al.
Publicado: (2020)

Correction to: Development of a genetic evaluation for hair shedding in American Angus cattle to improve thermotolerance
por: Durbin, Harly J., et al.
Publicado: (2021)

Large-effect pleiotropic or closely linked QTL segregate within and across ten US cattle breeds
por: Saatchi, Mahdi, et al.
Publicado: (2014)

Immunological Response to Single Pathogen Challenge with Agents of the Bovine Respiratory Disease Complex: An RNA-Sequence Analysis of the Bronchial Lymph Node Transcriptome
por: Tizioto, Polyana C., et al.
Publicado: (2015)

Recombination locations and rates in beef cattle assessed from parent-offspring pairs
por: Weng, Zi-Qing, et al.
Publicado: (2014)

Accuracy of direct genomic breeding values for nationally evaluated traits in US Limousin and Simmental beef cattle
por: Saatchi, Mahdi, et al.
Publicado: (2012)

Comparison of molecular breeding values based on within- and across-breed training in beef cattle
por: Kachman, Stephen D, et al.
Publicado: (2013)

Accuracy of prediction of simulated polygenic phenotypes and their underlying quantitative trait loci genotypes using real or imputed whole-genome markers in cattle
por: Hassani, Saeed, et al.
Publicado: (2015)

Genome-wide association analysis for feed efficiency in Angus cattle
por: Rolf, M M, et al.
Publicado: (2012)

Tissue Tropism in Host Transcriptional Response to Members of the Bovine Respiratory Disease Complex
por: Behura, Susanta K., et al.
Publicado: (2017)

Accuracies of genomic breeding values in American Angus beef cattle using K-means clustering for cross-validation
por: Saatchi, Mahdi, et al.
Publicado: (2011)

Annotated Draft Genome Assemblies for the Northern Bobwhite (Colinus virginianus) and the Scaled Quail (Callipepla squamata) Reveal Disparate Estimates of Modern Genome Diversity and Historic Effective Population Size
por: Oldeschulte, David L., et al.
Publicado: (2017)

Genome-wide association and genotype by environment interactions for growth traits in U.S. Red Angus cattle
por: Smith, Johanna L., et al.
Publicado: (2022)

Powerful detection of polygenic selection and evidence of environmental adaptation in US beef cattle
por: Rowan, Troy N., et al.
Publicado: (2021)

A certain invariance property of BLUE in a whole‐genome regression context
por: Gianola, Daniel, et al.
Publicado: (2019)

Northern Bobwhite (Colinus virginianus) Mitochondrial Population Genomics Reveals Structure, Divergence, and Evidence for Heteroplasmy
por: Halley, Yvette A., et al.
Publicado: (2015)

Lessons for livestock genomics from genome and transcriptome sequencing in cattle and other mammals
por: Taylor, Jeremy F., et al.
Publicado: (2016)

Loci associated with conception rate in crossbred beef heifers
por: Oliver, K. F., et al.
Publicado: (2020)

Stochastic, individual animal systems simulation model of beef cow–calf production: development and validation
por: Aherin, Dustin G, et al.
Publicado: (2022)

Retrospective analysis of cohort risk factors and feeding phase timing associated with noninfectious heart disease deaths in U.S. feedlot cattle
por: Johnson, Blaine T, et al.
Publicado: (2021)

A method to obtain exact single-step GBLUP for non-genotyped descendants when the genomic relationship matrix of ancestors is not available
por: Garrick, Dorian J., et al.
Publicado: (2022)

Accurate Genomic Predictions for Chronic Wasting Disease in U.S. White-Tailed Deer
por: Seabury, Christopher M., et al.
Publicado: (2020)

Selection for bull fertility: a review
por: Butler, Madison L, et al.
Publicado: (2019)

Reduction in accuracy of genomic prediction for ordered categorical data compared to continuous observations
por: Kizilkaya, Kadir, et al.
Publicado: (2014)

An efficient exact method to obtain GBLUP and single-step GBLUP when the genomic relationship matrix is singular
por: Fernando, Rohan L., et al.
Publicado: (2016)

Efficient strategies for leave-one-out cross validation for genomic best linear unbiased prediction
por: Cheng, Hao, et al.
Publicado: (2017)

Computational strategies for alternative single-step Bayesian regression models with large numbers of genotyped and non-genotyped animals
por: Fernando, Rohan L., et al.
Publicado: (2016)

Deregressing estimated breeding values and weighting information for genomic regression analyses
por: Garrick, Dorian J, et al.
Publicado: (2009)

A class of Bayesian methods to combine large numbers of genotyped and non-genotyped animals for whole-genome analyses
por: Fernando, Rohan L, et al.
Publicado: (2014)

The Accuracy and Bias of Single-Step Genomic Prediction for Populations Under Selection
por: Hsu, Wan-Ling, et al.
Publicado: (2017)

Candidate lethal haplotypes and causal mutations in Angus cattle
por: Hoff, Jesse L., et al.
Publicado: (2017)

Genome-wide association analysis for quantitative trait loci influencing Warner–Bratzler shear force in five taurine cattle breeds
por: McClure, M C, et al.
Publicado: (2012)

Validation of 46 loci associated with female fertility traits in cattle
por: Kiser, Jennifer N., et al.
Publicado: (2019)

Occurrence of enrofloxacin in overflows from animal lot and residential sewage lagoons and a receiving-stream
por: Ikem, Abua, et al.
Publicado: (2017)

Decision-making tools: stochastic simulation model accounting for the impacts of biological variation on success of bovine embryo transfer programs
por: Aherin, Dustin G, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_0dvjgh89vsb0ggqo0d6jlql6lq