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Screening effective differential expression genes for hepatic carcinoma with metastasis in the peripheral blood mononuclear cells by RNA-seq

Tumor metastasis is a multistep process involving a number of genetic alterations so that the genetic diagnosis is got increasingly attentions today. The aim of this study was to use RNA-seq to screen the effective differential expression genes in the peripheral blood mononuclear cells for the hepat...

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Autores principales: Shen, Yanting, Bu, Lu, Li, Rui, Chen, Zhenzhu, Tian, Fei, Lu, Na, Ge, Qinyu, Bai, Yunfei, Lu, Zuhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5438623/
https://www.ncbi.nlm.nih.gov/pubmed/28427195
http://dx.doi.org/10.18632/oncotarget.15855
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author Shen, Yanting
Bu, Lu
Li, Rui
Chen, Zhenzhu
Tian, Fei
Lu, Na
Ge, Qinyu
Bai, Yunfei
Lu, Zuhong
author_facet Shen, Yanting
Bu, Lu
Li, Rui
Chen, Zhenzhu
Tian, Fei
Lu, Na
Ge, Qinyu
Bai, Yunfei
Lu, Zuhong
author_sort Shen, Yanting
collection PubMed
description Tumor metastasis is a multistep process involving a number of genetic alterations so that the genetic diagnosis is got increasingly attentions today. The aim of this study was to use RNA-seq to screen the effective differential expression genes in the peripheral blood mononuclear cells for the hepatic carcinoma with metastasis. The results showed that hepatic carcinoma samples gathered according to different metastasis. CCL3, CCL3L1, JUN, IL8, and IL1B were identified in inflammation mediated by chemokine and cytokine signaling pathway (P00031) in the hepatic carcinoma samples with metastasis, and subsequently confirmed by quantitative real-time polymerase chain reaction. In conclusions, CCL3, CCL3L1, JUN, IL8, and IL1B have the potential to be considered as candidates for future molecular diagnosis of the hepatic carcinoma with metastasis. This work may provide us with new visions into the metastasis process and potential efficient clinical diagnosis in the future.
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spelling pubmed-54386232017-05-24 Screening effective differential expression genes for hepatic carcinoma with metastasis in the peripheral blood mononuclear cells by RNA-seq Shen, Yanting Bu, Lu Li, Rui Chen, Zhenzhu Tian, Fei Lu, Na Ge, Qinyu Bai, Yunfei Lu, Zuhong Oncotarget Research Paper Tumor metastasis is a multistep process involving a number of genetic alterations so that the genetic diagnosis is got increasingly attentions today. The aim of this study was to use RNA-seq to screen the effective differential expression genes in the peripheral blood mononuclear cells for the hepatic carcinoma with metastasis. The results showed that hepatic carcinoma samples gathered according to different metastasis. CCL3, CCL3L1, JUN, IL8, and IL1B were identified in inflammation mediated by chemokine and cytokine signaling pathway (P00031) in the hepatic carcinoma samples with metastasis, and subsequently confirmed by quantitative real-time polymerase chain reaction. In conclusions, CCL3, CCL3L1, JUN, IL8, and IL1B have the potential to be considered as candidates for future molecular diagnosis of the hepatic carcinoma with metastasis. This work may provide us with new visions into the metastasis process and potential efficient clinical diagnosis in the future. Impact Journals LLC 2017-03-02 /pmc/articles/PMC5438623/ /pubmed/28427195 http://dx.doi.org/10.18632/oncotarget.15855 Text en Copyright: © 2017 Shen et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) (CC-BY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Shen, Yanting
Bu, Lu
Li, Rui
Chen, Zhenzhu
Tian, Fei
Lu, Na
Ge, Qinyu
Bai, Yunfei
Lu, Zuhong
Screening effective differential expression genes for hepatic carcinoma with metastasis in the peripheral blood mononuclear cells by RNA-seq
title Screening effective differential expression genes for hepatic carcinoma with metastasis in the peripheral blood mononuclear cells by RNA-seq
title_full Screening effective differential expression genes for hepatic carcinoma with metastasis in the peripheral blood mononuclear cells by RNA-seq
title_fullStr Screening effective differential expression genes for hepatic carcinoma with metastasis in the peripheral blood mononuclear cells by RNA-seq
title_full_unstemmed Screening effective differential expression genes for hepatic carcinoma with metastasis in the peripheral blood mononuclear cells by RNA-seq
title_short Screening effective differential expression genes for hepatic carcinoma with metastasis in the peripheral blood mononuclear cells by RNA-seq
title_sort screening effective differential expression genes for hepatic carcinoma with metastasis in the peripheral blood mononuclear cells by rna-seq
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5438623/
https://www.ncbi.nlm.nih.gov/pubmed/28427195
http://dx.doi.org/10.18632/oncotarget.15855
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