Cargando…

Reproducible segmentation of white matter hyperintensities using a new statistical definition

OBJECTIVES: We present a method based on a proposed statistical definition of white matter hyperintensities (WMH), which can work with any combination of conventional magnetic resonance (MR) sequences without depending on manually delineated samples. MATERIALS AND METHODS: T1-weighted, T2-weighted,...

Descripción completa

Detalles Bibliográficos
Autores principales: Damangir, Soheil, Westman, Eric, Simmons, Andrew, Vrenken, Hugo, Wahlund, Lars-Olof, Spulber, Gabriela
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5440501/
https://www.ncbi.nlm.nih.gov/pubmed/27943055
http://dx.doi.org/10.1007/s10334-016-0599-3
_version_ 1783238070769811456
author Damangir, Soheil
Westman, Eric
Simmons, Andrew
Vrenken, Hugo
Wahlund, Lars-Olof
Spulber, Gabriela
author_facet Damangir, Soheil
Westman, Eric
Simmons, Andrew
Vrenken, Hugo
Wahlund, Lars-Olof
Spulber, Gabriela
author_sort Damangir, Soheil
collection PubMed
description OBJECTIVES: We present a method based on a proposed statistical definition of white matter hyperintensities (WMH), which can work with any combination of conventional magnetic resonance (MR) sequences without depending on manually delineated samples. MATERIALS AND METHODS: T1-weighted, T2-weighted, FLAIR, and PD sequences acquired at 1.5 Tesla from 119 subjects from the Kings Health Partners-Dementia Case Register (healthy controls, mild cognitive impairment, Alzheimer’s disease) were used. The segmentation was performed using a proposed definition for WMH based on the one-tailed Kolmogorov–Smirnov test. RESULTS: The presented method was verified, given all possible combinations of input sequences, against manual segmentations and a high similarity (Dice 0.85–0.91) was observed. Comparing segmentations with different input sequences to one another also yielded a high similarity (Dice 0.83–0.94) that exceeded intra-rater similarity (Dice 0.75–0.91). We compared the results with those of other available methods and showed that the segmentation based on the proposed definition has better accuracy and reproducibility in the test dataset used. CONCLUSION: Overall, the presented definition is shown to produce accurate results with higher reproducibility than manual delineation. This approach can be an alternative to other manual or automatic methods not only because of its accuracy, but also due to its good reproducibility. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s10334-016-0599-3) contains supplementary material, which is available to authorized users.
format Online
Article
Text
id pubmed-5440501
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Springer Berlin Heidelberg
record_format MEDLINE/PubMed
spelling pubmed-54405012017-06-08 Reproducible segmentation of white matter hyperintensities using a new statistical definition Damangir, Soheil Westman, Eric Simmons, Andrew Vrenken, Hugo Wahlund, Lars-Olof Spulber, Gabriela MAGMA Research Article OBJECTIVES: We present a method based on a proposed statistical definition of white matter hyperintensities (WMH), which can work with any combination of conventional magnetic resonance (MR) sequences without depending on manually delineated samples. MATERIALS AND METHODS: T1-weighted, T2-weighted, FLAIR, and PD sequences acquired at 1.5 Tesla from 119 subjects from the Kings Health Partners-Dementia Case Register (healthy controls, mild cognitive impairment, Alzheimer’s disease) were used. The segmentation was performed using a proposed definition for WMH based on the one-tailed Kolmogorov–Smirnov test. RESULTS: The presented method was verified, given all possible combinations of input sequences, against manual segmentations and a high similarity (Dice 0.85–0.91) was observed. Comparing segmentations with different input sequences to one another also yielded a high similarity (Dice 0.83–0.94) that exceeded intra-rater similarity (Dice 0.75–0.91). We compared the results with those of other available methods and showed that the segmentation based on the proposed definition has better accuracy and reproducibility in the test dataset used. CONCLUSION: Overall, the presented definition is shown to produce accurate results with higher reproducibility than manual delineation. This approach can be an alternative to other manual or automatic methods not only because of its accuracy, but also due to its good reproducibility. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s10334-016-0599-3) contains supplementary material, which is available to authorized users. Springer Berlin Heidelberg 2016-12-09 2017 /pmc/articles/PMC5440501/ /pubmed/27943055 http://dx.doi.org/10.1007/s10334-016-0599-3 Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Research Article
Damangir, Soheil
Westman, Eric
Simmons, Andrew
Vrenken, Hugo
Wahlund, Lars-Olof
Spulber, Gabriela
Reproducible segmentation of white matter hyperintensities using a new statistical definition
title Reproducible segmentation of white matter hyperintensities using a new statistical definition
title_full Reproducible segmentation of white matter hyperintensities using a new statistical definition
title_fullStr Reproducible segmentation of white matter hyperintensities using a new statistical definition
title_full_unstemmed Reproducible segmentation of white matter hyperintensities using a new statistical definition
title_short Reproducible segmentation of white matter hyperintensities using a new statistical definition
title_sort reproducible segmentation of white matter hyperintensities using a new statistical definition
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5440501/
https://www.ncbi.nlm.nih.gov/pubmed/27943055
http://dx.doi.org/10.1007/s10334-016-0599-3
work_keys_str_mv AT damangirsoheil reproduciblesegmentationofwhitematterhyperintensitiesusinganewstatisticaldefinition
AT westmaneric reproduciblesegmentationofwhitematterhyperintensitiesusinganewstatisticaldefinition
AT simmonsandrew reproduciblesegmentationofwhitematterhyperintensitiesusinganewstatisticaldefinition
AT vrenkenhugo reproduciblesegmentationofwhitematterhyperintensitiesusinganewstatisticaldefinition
AT wahlundlarsolof reproduciblesegmentationofwhitematterhyperintensitiesusinganewstatisticaldefinition
AT spulbergabriela reproduciblesegmentationofwhitematterhyperintensitiesusinganewstatisticaldefinition