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Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region
OBJECTIVE: The purpose of this study was to investigate the relationship between visual score of emphysema and homology-based emphysema quantification (HEQ) and evaluate whether visual score was accurately predicted by machine learning and HEQ. MATERIALS AND METHODS: A total of 115 anonymized comput...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5444793/ https://www.ncbi.nlm.nih.gov/pubmed/28542398 http://dx.doi.org/10.1371/journal.pone.0178217 |
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author | Nishio, Mizuho Nakane, Kazuaki Kubo, Takeshi Yakami, Masahiro Emoto, Yutaka Nishio, Mari Togashi, Kaori |
author_facet | Nishio, Mizuho Nakane, Kazuaki Kubo, Takeshi Yakami, Masahiro Emoto, Yutaka Nishio, Mari Togashi, Kaori |
author_sort | Nishio, Mizuho |
collection | PubMed |
description | OBJECTIVE: The purpose of this study was to investigate the relationship between visual score of emphysema and homology-based emphysema quantification (HEQ) and evaluate whether visual score was accurately predicted by machine learning and HEQ. MATERIALS AND METHODS: A total of 115 anonymized computed tomography images from 39 patients were obtained from a public database. Emphysema quantification of these images was performed by measuring the percentage of low-attenuation lung area (LAA%). The following values related to HEQ were obtained: nb(0) and nb(1). LAA% and HEQ were calculated at various threshold levels ranging from −1000 HU to −700 HU. Spearman’s correlation coefficients between emphysema quantification and visual score were calculated at the various threshold levels. Visual score was predicted by machine learning and emphysema quantification (LAA% or HEQ). Random Forest was used as a machine learning algorithm, and accuracy of prediction was evaluated by leave-one-patient-out cross validation. The difference in the accuracy was assessed using McNemar’s test. RESULTS: The correlation coefficients between emphysema quantification and visual score were as follows: LAA% (−950 HU), 0.567; LAA% (−910 HU), 0.654; LAA% (−875 HU), 0.704; nb(0) (−950 HU), 0.552; nb(0) (−910 HU), 0.629; nb(0) (−875 HU), 0.473; nb(1) (−950 HU), 0.149; nb(1) (−910 HU), 0.519; and nb(1) (−875 HU), 0.716. The accuracy of prediction was as follows: LAA%, 55.7% and HEQ, 66.1%. The difference in accuracy was statistically significant (p = 0.0290). CONCLUSION: LAA% and HEQ at −875 HU showed a stronger correlation with visual score than those at −910 or −950 HU. HEQ was more useful than LAA% for predicting visual score. |
format | Online Article Text |
id | pubmed-5444793 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-54447932017-06-12 Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region Nishio, Mizuho Nakane, Kazuaki Kubo, Takeshi Yakami, Masahiro Emoto, Yutaka Nishio, Mari Togashi, Kaori PLoS One Research Article OBJECTIVE: The purpose of this study was to investigate the relationship between visual score of emphysema and homology-based emphysema quantification (HEQ) and evaluate whether visual score was accurately predicted by machine learning and HEQ. MATERIALS AND METHODS: A total of 115 anonymized computed tomography images from 39 patients were obtained from a public database. Emphysema quantification of these images was performed by measuring the percentage of low-attenuation lung area (LAA%). The following values related to HEQ were obtained: nb(0) and nb(1). LAA% and HEQ were calculated at various threshold levels ranging from −1000 HU to −700 HU. Spearman’s correlation coefficients between emphysema quantification and visual score were calculated at the various threshold levels. Visual score was predicted by machine learning and emphysema quantification (LAA% or HEQ). Random Forest was used as a machine learning algorithm, and accuracy of prediction was evaluated by leave-one-patient-out cross validation. The difference in the accuracy was assessed using McNemar’s test. RESULTS: The correlation coefficients between emphysema quantification and visual score were as follows: LAA% (−950 HU), 0.567; LAA% (−910 HU), 0.654; LAA% (−875 HU), 0.704; nb(0) (−950 HU), 0.552; nb(0) (−910 HU), 0.629; nb(0) (−875 HU), 0.473; nb(1) (−950 HU), 0.149; nb(1) (−910 HU), 0.519; and nb(1) (−875 HU), 0.716. The accuracy of prediction was as follows: LAA%, 55.7% and HEQ, 66.1%. The difference in accuracy was statistically significant (p = 0.0290). CONCLUSION: LAA% and HEQ at −875 HU showed a stronger correlation with visual score than those at −910 or −950 HU. HEQ was more useful than LAA% for predicting visual score. Public Library of Science 2017-05-25 /pmc/articles/PMC5444793/ /pubmed/28542398 http://dx.doi.org/10.1371/journal.pone.0178217 Text en © 2017 Nishio et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Nishio, Mizuho Nakane, Kazuaki Kubo, Takeshi Yakami, Masahiro Emoto, Yutaka Nishio, Mari Togashi, Kaori Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region |
title | Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region |
title_full | Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region |
title_fullStr | Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region |
title_full_unstemmed | Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region |
title_short | Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region |
title_sort | automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5444793/ https://www.ncbi.nlm.nih.gov/pubmed/28542398 http://dx.doi.org/10.1371/journal.pone.0178217 |
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