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Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region

OBJECTIVE: The purpose of this study was to investigate the relationship between visual score of emphysema and homology-based emphysema quantification (HEQ) and evaluate whether visual score was accurately predicted by machine learning and HEQ. MATERIALS AND METHODS: A total of 115 anonymized comput...

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Autores principales: Nishio, Mizuho, Nakane, Kazuaki, Kubo, Takeshi, Yakami, Masahiro, Emoto, Yutaka, Nishio, Mari, Togashi, Kaori
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5444793/
https://www.ncbi.nlm.nih.gov/pubmed/28542398
http://dx.doi.org/10.1371/journal.pone.0178217
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author Nishio, Mizuho
Nakane, Kazuaki
Kubo, Takeshi
Yakami, Masahiro
Emoto, Yutaka
Nishio, Mari
Togashi, Kaori
author_facet Nishio, Mizuho
Nakane, Kazuaki
Kubo, Takeshi
Yakami, Masahiro
Emoto, Yutaka
Nishio, Mari
Togashi, Kaori
author_sort Nishio, Mizuho
collection PubMed
description OBJECTIVE: The purpose of this study was to investigate the relationship between visual score of emphysema and homology-based emphysema quantification (HEQ) and evaluate whether visual score was accurately predicted by machine learning and HEQ. MATERIALS AND METHODS: A total of 115 anonymized computed tomography images from 39 patients were obtained from a public database. Emphysema quantification of these images was performed by measuring the percentage of low-attenuation lung area (LAA%). The following values related to HEQ were obtained: nb(0) and nb(1). LAA% and HEQ were calculated at various threshold levels ranging from −1000 HU to −700 HU. Spearman’s correlation coefficients between emphysema quantification and visual score were calculated at the various threshold levels. Visual score was predicted by machine learning and emphysema quantification (LAA% or HEQ). Random Forest was used as a machine learning algorithm, and accuracy of prediction was evaluated by leave-one-patient-out cross validation. The difference in the accuracy was assessed using McNemar’s test. RESULTS: The correlation coefficients between emphysema quantification and visual score were as follows: LAA% (−950 HU), 0.567; LAA% (−910 HU), 0.654; LAA% (−875 HU), 0.704; nb(0) (−950 HU), 0.552; nb(0) (−910 HU), 0.629; nb(0) (−875 HU), 0.473; nb(1) (−950 HU), 0.149; nb(1) (−910 HU), 0.519; and nb(1) (−875 HU), 0.716. The accuracy of prediction was as follows: LAA%, 55.7% and HEQ, 66.1%. The difference in accuracy was statistically significant (p = 0.0290). CONCLUSION: LAA% and HEQ at −875 HU showed a stronger correlation with visual score than those at −910 or −950 HU. HEQ was more useful than LAA% for predicting visual score.
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spelling pubmed-54447932017-06-12 Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region Nishio, Mizuho Nakane, Kazuaki Kubo, Takeshi Yakami, Masahiro Emoto, Yutaka Nishio, Mari Togashi, Kaori PLoS One Research Article OBJECTIVE: The purpose of this study was to investigate the relationship between visual score of emphysema and homology-based emphysema quantification (HEQ) and evaluate whether visual score was accurately predicted by machine learning and HEQ. MATERIALS AND METHODS: A total of 115 anonymized computed tomography images from 39 patients were obtained from a public database. Emphysema quantification of these images was performed by measuring the percentage of low-attenuation lung area (LAA%). The following values related to HEQ were obtained: nb(0) and nb(1). LAA% and HEQ were calculated at various threshold levels ranging from −1000 HU to −700 HU. Spearman’s correlation coefficients between emphysema quantification and visual score were calculated at the various threshold levels. Visual score was predicted by machine learning and emphysema quantification (LAA% or HEQ). Random Forest was used as a machine learning algorithm, and accuracy of prediction was evaluated by leave-one-patient-out cross validation. The difference in the accuracy was assessed using McNemar’s test. RESULTS: The correlation coefficients between emphysema quantification and visual score were as follows: LAA% (−950 HU), 0.567; LAA% (−910 HU), 0.654; LAA% (−875 HU), 0.704; nb(0) (−950 HU), 0.552; nb(0) (−910 HU), 0.629; nb(0) (−875 HU), 0.473; nb(1) (−950 HU), 0.149; nb(1) (−910 HU), 0.519; and nb(1) (−875 HU), 0.716. The accuracy of prediction was as follows: LAA%, 55.7% and HEQ, 66.1%. The difference in accuracy was statistically significant (p = 0.0290). CONCLUSION: LAA% and HEQ at −875 HU showed a stronger correlation with visual score than those at −910 or −950 HU. HEQ was more useful than LAA% for predicting visual score. Public Library of Science 2017-05-25 /pmc/articles/PMC5444793/ /pubmed/28542398 http://dx.doi.org/10.1371/journal.pone.0178217 Text en © 2017 Nishio et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Nishio, Mizuho
Nakane, Kazuaki
Kubo, Takeshi
Yakami, Masahiro
Emoto, Yutaka
Nishio, Mari
Togashi, Kaori
Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region
title Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region
title_full Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region
title_fullStr Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region
title_full_unstemmed Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region
title_short Automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region
title_sort automated prediction of emphysema visual score using homology-based quantification of low-attenuation lung region
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5444793/
https://www.ncbi.nlm.nih.gov/pubmed/28542398
http://dx.doi.org/10.1371/journal.pone.0178217
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