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Pitfalls in Root Trait Calculations: How Ignoring Diameter Heterogeneity Can Lead to Overestimation of Functional Traits
Specific root length (SRL) and root tissue density (RTD) are ecologically functional traits which are calculated from root length or volume and root dry weight. Both can be converted into each other using the root diameter assuming roots are cylindrical. The calculation of volume from length or leng...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2017
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5447056/ https://www.ncbi.nlm.nih.gov/pubmed/28611812 http://dx.doi.org/10.3389/fpls.2017.00898 |
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author | Rose, Laura |
author_facet | Rose, Laura |
author_sort | Rose, Laura |
collection | PubMed |
description | Specific root length (SRL) and root tissue density (RTD) are ecologically functional traits which are calculated from root length or volume and root dry weight. Both can be converted into each other using the root diameter assuming roots are cylindrical. The calculation of volume from length or length from volume is, however, problematic because samples of roots do usually not have a constant diameter. Ignorance of the diameter heterogeneity leads to an overestimation of length and an underestimation of volume if standard formulas are used. Here I show for two datasets that SRL and RTD are overestimated on average 67% for the two analyzed datasets, but up to 150%, if calculated from each other. I further highlight that the volume values for the total sample as provided by the commonly used software WinRHIZO(TM) should only be used for objects with constant diameter. I recommend to use volume values provided for each diameter class of a sample if WinRHIZO(TM) is used. If manual methods, like the line-intersect method, are used, roots should be separated into diameter classes before length measurements if the volume is calculated from length. Trait to trait conversions for whole samples are not recommended. |
format | Online Article Text |
id | pubmed-5447056 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-54470562017-06-13 Pitfalls in Root Trait Calculations: How Ignoring Diameter Heterogeneity Can Lead to Overestimation of Functional Traits Rose, Laura Front Plant Sci Plant Science Specific root length (SRL) and root tissue density (RTD) are ecologically functional traits which are calculated from root length or volume and root dry weight. Both can be converted into each other using the root diameter assuming roots are cylindrical. The calculation of volume from length or length from volume is, however, problematic because samples of roots do usually not have a constant diameter. Ignorance of the diameter heterogeneity leads to an overestimation of length and an underestimation of volume if standard formulas are used. Here I show for two datasets that SRL and RTD are overestimated on average 67% for the two analyzed datasets, but up to 150%, if calculated from each other. I further highlight that the volume values for the total sample as provided by the commonly used software WinRHIZO(TM) should only be used for objects with constant diameter. I recommend to use volume values provided for each diameter class of a sample if WinRHIZO(TM) is used. If manual methods, like the line-intersect method, are used, roots should be separated into diameter classes before length measurements if the volume is calculated from length. Trait to trait conversions for whole samples are not recommended. Frontiers Media S.A. 2017-05-29 /pmc/articles/PMC5447056/ /pubmed/28611812 http://dx.doi.org/10.3389/fpls.2017.00898 Text en Copyright © 2017 Rose. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Rose, Laura Pitfalls in Root Trait Calculations: How Ignoring Diameter Heterogeneity Can Lead to Overestimation of Functional Traits |
title | Pitfalls in Root Trait Calculations: How Ignoring Diameter Heterogeneity Can Lead to Overestimation of Functional Traits |
title_full | Pitfalls in Root Trait Calculations: How Ignoring Diameter Heterogeneity Can Lead to Overestimation of Functional Traits |
title_fullStr | Pitfalls in Root Trait Calculations: How Ignoring Diameter Heterogeneity Can Lead to Overestimation of Functional Traits |
title_full_unstemmed | Pitfalls in Root Trait Calculations: How Ignoring Diameter Heterogeneity Can Lead to Overestimation of Functional Traits |
title_short | Pitfalls in Root Trait Calculations: How Ignoring Diameter Heterogeneity Can Lead to Overestimation of Functional Traits |
title_sort | pitfalls in root trait calculations: how ignoring diameter heterogeneity can lead to overestimation of functional traits |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5447056/ https://www.ncbi.nlm.nih.gov/pubmed/28611812 http://dx.doi.org/10.3389/fpls.2017.00898 |
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