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High-order epistasis shapes evolutionary trajectories
High-order epistasis—where the effect of a mutation is determined by interactions with two or more other mutations—makes small, but detectable, contributions to genotype-fitness maps. While epistasis between pairs of mutations is known to be an important determinant of evolutionary trajectories, the...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5448810/ https://www.ncbi.nlm.nih.gov/pubmed/28505183 http://dx.doi.org/10.1371/journal.pcbi.1005541 |
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author | Sailer, Zachary R. Harms, Michael J. |
author_facet | Sailer, Zachary R. Harms, Michael J. |
author_sort | Sailer, Zachary R. |
collection | PubMed |
description | High-order epistasis—where the effect of a mutation is determined by interactions with two or more other mutations—makes small, but detectable, contributions to genotype-fitness maps. While epistasis between pairs of mutations is known to be an important determinant of evolutionary trajectories, the evolutionary consequences of high-order epistasis remain poorly understood. To determine the effect of high-order epistasis on evolutionary trajectories, we computationally removed high-order epistasis from experimental genotype-fitness maps containing all binary combinations of five mutations. We then compared trajectories through maps both with and without high-order epistasis. We found that high-order epistasis strongly shapes the accessibility and probability of evolutionary trajectories. A closer analysis revealed that the magnitude of epistasis, not its order, predicts is effects on evolutionary trajectories. We further find that high-order epistasis makes it impossible to predict evolutionary trajectories from the individual and paired effects of mutations. We therefore conclude that high-order epistasis profoundly shapes evolutionary trajectories through genotype-fitness maps. |
format | Online Article Text |
id | pubmed-5448810 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-54488102017-06-06 High-order epistasis shapes evolutionary trajectories Sailer, Zachary R. Harms, Michael J. PLoS Comput Biol Research Article High-order epistasis—where the effect of a mutation is determined by interactions with two or more other mutations—makes small, but detectable, contributions to genotype-fitness maps. While epistasis between pairs of mutations is known to be an important determinant of evolutionary trajectories, the evolutionary consequences of high-order epistasis remain poorly understood. To determine the effect of high-order epistasis on evolutionary trajectories, we computationally removed high-order epistasis from experimental genotype-fitness maps containing all binary combinations of five mutations. We then compared trajectories through maps both with and without high-order epistasis. We found that high-order epistasis strongly shapes the accessibility and probability of evolutionary trajectories. A closer analysis revealed that the magnitude of epistasis, not its order, predicts is effects on evolutionary trajectories. We further find that high-order epistasis makes it impossible to predict evolutionary trajectories from the individual and paired effects of mutations. We therefore conclude that high-order epistasis profoundly shapes evolutionary trajectories through genotype-fitness maps. Public Library of Science 2017-05-15 /pmc/articles/PMC5448810/ /pubmed/28505183 http://dx.doi.org/10.1371/journal.pcbi.1005541 Text en © 2017 Sailer, Harms http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Sailer, Zachary R. Harms, Michael J. High-order epistasis shapes evolutionary trajectories |
title | High-order epistasis shapes evolutionary trajectories |
title_full | High-order epistasis shapes evolutionary trajectories |
title_fullStr | High-order epistasis shapes evolutionary trajectories |
title_full_unstemmed | High-order epistasis shapes evolutionary trajectories |
title_short | High-order epistasis shapes evolutionary trajectories |
title_sort | high-order epistasis shapes evolutionary trajectories |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5448810/ https://www.ncbi.nlm.nih.gov/pubmed/28505183 http://dx.doi.org/10.1371/journal.pcbi.1005541 |
work_keys_str_mv | AT sailerzacharyr highorderepistasisshapesevolutionarytrajectories AT harmsmichaelj highorderepistasisshapesevolutionarytrajectories |