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Fast and robust single PCR for Plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase I gene

BACKGROUND: Molecular tools for detecting malaria-infected mosquitoes with improved practicality, sensitivity and specificity, and high-throughput are required. A common PCR technique used to detect mosquitoes infected with Plasmodium spp. is a nested PCR assay based on the 18s-rRNA gene. However, t...

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Autores principales: Echeverry, Diego F., Deason, Nicholas A., Makuru, Victoria, Davidson, Jenna, Xiao, Honglin, Niedbalski, Julie, Yu, Xiaoyu, Stevenson, Jennifer C., Bugoro, Hugo, Aparaimo, Allan, Reuben, Hedrick, Cooper, Robert, Burkot, Thomas R., Russell, Tanya L., Collins, Frank H., Lobo, Neil F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5452387/
https://www.ncbi.nlm.nih.gov/pubmed/28569159
http://dx.doi.org/10.1186/s12936-017-1881-1
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author Echeverry, Diego F.
Deason, Nicholas A.
Makuru, Victoria
Davidson, Jenna
Xiao, Honglin
Niedbalski, Julie
Yu, Xiaoyu
Stevenson, Jennifer C.
Bugoro, Hugo
Aparaimo, Allan
Reuben, Hedrick
Cooper, Robert
Burkot, Thomas R.
Russell, Tanya L.
Collins, Frank H.
Lobo, Neil F.
author_facet Echeverry, Diego F.
Deason, Nicholas A.
Makuru, Victoria
Davidson, Jenna
Xiao, Honglin
Niedbalski, Julie
Yu, Xiaoyu
Stevenson, Jennifer C.
Bugoro, Hugo
Aparaimo, Allan
Reuben, Hedrick
Cooper, Robert
Burkot, Thomas R.
Russell, Tanya L.
Collins, Frank H.
Lobo, Neil F.
author_sort Echeverry, Diego F.
collection PubMed
description BACKGROUND: Molecular tools for detecting malaria-infected mosquitoes with improved practicality, sensitivity and specificity, and high-throughput are required. A common PCR technique used to detect mosquitoes infected with Plasmodium spp. is a nested PCR assay based on the 18s-rRNA gene. However, this technique has several technical limitations, is laborious and time consuming. METHODS: In this study, a PCR-based on the Plasmodium cytochrome oxidase I (COX-I) gene was compared with the 18s-rRNA nested PCR using serial dilutions (330–0.0012 pg) of DNA from Plasmodium vivax, Plasmodium falciparum and Plasmodium knowlesi and with DNA from 48 positive and negative Kenyan mosquitoes (previously detected by using both ELISA and PCR). This assay for Plasmodium spp. DNA detection using the fast COX-I PCR assay was then performed individually on 2122 field collected mosquitoes (from the Solomon Islands) in which DNA was extracted from head and thorax. RESULTS: The fast COX-I PCR assay took 1 h to run and consistently detected as low as to 0.043 pg of parasite DNA (equivalent to two parasites) in a single PCR, while analyses with the 18s-rRNA nested PCR required 4 h to complete with a consistent detection threshold of 1.5 pg of DNA. Both assays produced concordant results when applied to the 48 Kenyan control samples with known Plasmodium spp. infection status. The fast COX-I PCR identified 23/2122 Plasmodium-infected mosquitoes from the Solomon Islands. CONCLUSIONS: This new COX-I PCR adapted for a single PCR reaction is a faster, simpler, cheaper, more sensitive technique amenable to high-throughput analyses for Plasmodium DNA detection in mosquitoes and is comparable to the 18s-rRNA nested PCR. The improved sensitivity seen with the fast COX-I PCR will improve the accuracy of mosquito infection rate determination.
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spelling pubmed-54523872017-06-01 Fast and robust single PCR for Plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase I gene Echeverry, Diego F. Deason, Nicholas A. Makuru, Victoria Davidson, Jenna Xiao, Honglin Niedbalski, Julie Yu, Xiaoyu Stevenson, Jennifer C. Bugoro, Hugo Aparaimo, Allan Reuben, Hedrick Cooper, Robert Burkot, Thomas R. Russell, Tanya L. Collins, Frank H. Lobo, Neil F. Malar J Methodology BACKGROUND: Molecular tools for detecting malaria-infected mosquitoes with improved practicality, sensitivity and specificity, and high-throughput are required. A common PCR technique used to detect mosquitoes infected with Plasmodium spp. is a nested PCR assay based on the 18s-rRNA gene. However, this technique has several technical limitations, is laborious and time consuming. METHODS: In this study, a PCR-based on the Plasmodium cytochrome oxidase I (COX-I) gene was compared with the 18s-rRNA nested PCR using serial dilutions (330–0.0012 pg) of DNA from Plasmodium vivax, Plasmodium falciparum and Plasmodium knowlesi and with DNA from 48 positive and negative Kenyan mosquitoes (previously detected by using both ELISA and PCR). This assay for Plasmodium spp. DNA detection using the fast COX-I PCR assay was then performed individually on 2122 field collected mosquitoes (from the Solomon Islands) in which DNA was extracted from head and thorax. RESULTS: The fast COX-I PCR assay took 1 h to run and consistently detected as low as to 0.043 pg of parasite DNA (equivalent to two parasites) in a single PCR, while analyses with the 18s-rRNA nested PCR required 4 h to complete with a consistent detection threshold of 1.5 pg of DNA. Both assays produced concordant results when applied to the 48 Kenyan control samples with known Plasmodium spp. infection status. The fast COX-I PCR identified 23/2122 Plasmodium-infected mosquitoes from the Solomon Islands. CONCLUSIONS: This new COX-I PCR adapted for a single PCR reaction is a faster, simpler, cheaper, more sensitive technique amenable to high-throughput analyses for Plasmodium DNA detection in mosquitoes and is comparable to the 18s-rRNA nested PCR. The improved sensitivity seen with the fast COX-I PCR will improve the accuracy of mosquito infection rate determination. BioMed Central 2017-05-31 /pmc/articles/PMC5452387/ /pubmed/28569159 http://dx.doi.org/10.1186/s12936-017-1881-1 Text en © The Author(s) 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Methodology
Echeverry, Diego F.
Deason, Nicholas A.
Makuru, Victoria
Davidson, Jenna
Xiao, Honglin
Niedbalski, Julie
Yu, Xiaoyu
Stevenson, Jennifer C.
Bugoro, Hugo
Aparaimo, Allan
Reuben, Hedrick
Cooper, Robert
Burkot, Thomas R.
Russell, Tanya L.
Collins, Frank H.
Lobo, Neil F.
Fast and robust single PCR for Plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase I gene
title Fast and robust single PCR for Plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase I gene
title_full Fast and robust single PCR for Plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase I gene
title_fullStr Fast and robust single PCR for Plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase I gene
title_full_unstemmed Fast and robust single PCR for Plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase I gene
title_short Fast and robust single PCR for Plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase I gene
title_sort fast and robust single pcr for plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase i gene
topic Methodology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5452387/
https://www.ncbi.nlm.nih.gov/pubmed/28569159
http://dx.doi.org/10.1186/s12936-017-1881-1
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