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Microbial Community Structure in a Serpentine-Hosted Abiotic Gas Seepage at the Chimaera Ophiolite, Turkey

The surface waters at the ultramafic ophiolitic outcrop in Chimaera, Turkey, are characterized by high pH values and high metal levels due to the percolation of fluids through areas of active serpentinization. We describe the influence of the liquid chemistry, mineralogy, and H(2) and CH(4) levels o...

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Autores principales: Neubeck, Anna, Sun, Li, Müller, Bettina, Ivarsson, Magnus, Hosgörmez, Hakan, Özcan, Dogacan, Broman, Curt, Schnürer, Anna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5452829/
https://www.ncbi.nlm.nih.gov/pubmed/28389534
http://dx.doi.org/10.1128/AEM.03430-16
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author Neubeck, Anna
Sun, Li
Müller, Bettina
Ivarsson, Magnus
Hosgörmez, Hakan
Özcan, Dogacan
Broman, Curt
Schnürer, Anna
author_facet Neubeck, Anna
Sun, Li
Müller, Bettina
Ivarsson, Magnus
Hosgörmez, Hakan
Özcan, Dogacan
Broman, Curt
Schnürer, Anna
author_sort Neubeck, Anna
collection PubMed
description The surface waters at the ultramafic ophiolitic outcrop in Chimaera, Turkey, are characterized by high pH values and high metal levels due to the percolation of fluids through areas of active serpentinization. We describe the influence of the liquid chemistry, mineralogy, and H(2) and CH(4) levels on the bacterial community structure in a semidry, exposed, ultramafic environment. The bacterial and archaeal community structures were monitored using Illumina sequencing targeting the 16S rRNA gene. At all sampling points, four phyla, Proteobacteria, Actinobacteria, Chloroflexi, and Acidobacteria, accounted for the majority of taxa. Members of the Chloroflexi phylum dominated low-diversity sites, whereas Proteobacteria dominated high-diversity sites. Methane, nitrogen, iron, and hydrogen oxidizers were detected as well as archaea and metal-resistant bacteria. IMPORTANCE Our study is a comprehensive microbial investigation of the Chimaera ophiolite. DNA has been extracted from 16 sites in the area and has been studied from microbial and geochemical points of view. We describe a microbial community structure that is dependent on terrestrial, serpentinization-driven abiotic H(2), which is poorly studied due to the rarity of these environments on Earth.
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spelling pubmed-54528292017-06-27 Microbial Community Structure in a Serpentine-Hosted Abiotic Gas Seepage at the Chimaera Ophiolite, Turkey Neubeck, Anna Sun, Li Müller, Bettina Ivarsson, Magnus Hosgörmez, Hakan Özcan, Dogacan Broman, Curt Schnürer, Anna Appl Environ Microbiol Geomicrobiology The surface waters at the ultramafic ophiolitic outcrop in Chimaera, Turkey, are characterized by high pH values and high metal levels due to the percolation of fluids through areas of active serpentinization. We describe the influence of the liquid chemistry, mineralogy, and H(2) and CH(4) levels on the bacterial community structure in a semidry, exposed, ultramafic environment. The bacterial and archaeal community structures were monitored using Illumina sequencing targeting the 16S rRNA gene. At all sampling points, four phyla, Proteobacteria, Actinobacteria, Chloroflexi, and Acidobacteria, accounted for the majority of taxa. Members of the Chloroflexi phylum dominated low-diversity sites, whereas Proteobacteria dominated high-diversity sites. Methane, nitrogen, iron, and hydrogen oxidizers were detected as well as archaea and metal-resistant bacteria. IMPORTANCE Our study is a comprehensive microbial investigation of the Chimaera ophiolite. DNA has been extracted from 16 sites in the area and has been studied from microbial and geochemical points of view. We describe a microbial community structure that is dependent on terrestrial, serpentinization-driven abiotic H(2), which is poorly studied due to the rarity of these environments on Earth. American Society for Microbiology 2017-05-31 /pmc/articles/PMC5452829/ /pubmed/28389534 http://dx.doi.org/10.1128/AEM.03430-16 Text en Copyright © 2017 Neubeck et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (http://creativecommons.org/licenses/by/4.0/) .
spellingShingle Geomicrobiology
Neubeck, Anna
Sun, Li
Müller, Bettina
Ivarsson, Magnus
Hosgörmez, Hakan
Özcan, Dogacan
Broman, Curt
Schnürer, Anna
Microbial Community Structure in a Serpentine-Hosted Abiotic Gas Seepage at the Chimaera Ophiolite, Turkey
title Microbial Community Structure in a Serpentine-Hosted Abiotic Gas Seepage at the Chimaera Ophiolite, Turkey
title_full Microbial Community Structure in a Serpentine-Hosted Abiotic Gas Seepage at the Chimaera Ophiolite, Turkey
title_fullStr Microbial Community Structure in a Serpentine-Hosted Abiotic Gas Seepage at the Chimaera Ophiolite, Turkey
title_full_unstemmed Microbial Community Structure in a Serpentine-Hosted Abiotic Gas Seepage at the Chimaera Ophiolite, Turkey
title_short Microbial Community Structure in a Serpentine-Hosted Abiotic Gas Seepage at the Chimaera Ophiolite, Turkey
title_sort microbial community structure in a serpentine-hosted abiotic gas seepage at the chimaera ophiolite, turkey
topic Geomicrobiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5452829/
https://www.ncbi.nlm.nih.gov/pubmed/28389534
http://dx.doi.org/10.1128/AEM.03430-16
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