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Identification and Expression Profiling of the Auxin Response Factors in Dendrobium officinale under Abiotic Stresses
Auxin response factor (ARF) proteins play roles in plant responses to diverse environmental stresses by binding specifically to the auxin response element in the promoters of target genes. Using our latest public Dendrobium transcriptomes, a comprehensive characterization and analysis of 14 DnARF ge...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5454840/ https://www.ncbi.nlm.nih.gov/pubmed/28471373 http://dx.doi.org/10.3390/ijms18050927 |
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author | Chen, Zhehao Yuan, Ye Fu, Di Shen, Chenjia Yang, Yanjun |
author_facet | Chen, Zhehao Yuan, Ye Fu, Di Shen, Chenjia Yang, Yanjun |
author_sort | Chen, Zhehao |
collection | PubMed |
description | Auxin response factor (ARF) proteins play roles in plant responses to diverse environmental stresses by binding specifically to the auxin response element in the promoters of target genes. Using our latest public Dendrobium transcriptomes, a comprehensive characterization and analysis of 14 DnARF genes were performed. Three selected DnARFs, including DnARF1, DnARF4, and DnARF6, were confirmed to be nuclear proteins according to their transient expression in epidermal cells of Nicotiana benthamiana leaves. Furthermore, the transcription activation abilities of DnARF1, DnARF4, and DnARF6 were tested in a yeast system. Our data showed that DnARF6 is a transcriptional activator in Dendrobium officinale. To uncover the basic information of DnARF gene responses to abiotic stresses, we analyzed their expression patterns under various hormones and abiotic treatments. Based on our data, several hormones and significant stress responsive DnARF genes have been identified. Since auxin and ARF genes have been identified in many plant species, our data is imperative to reveal the function of ARF mediated auxin signaling in the adaptation to the challenging Dendrobium environment. |
format | Online Article Text |
id | pubmed-5454840 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-54548402017-06-08 Identification and Expression Profiling of the Auxin Response Factors in Dendrobium officinale under Abiotic Stresses Chen, Zhehao Yuan, Ye Fu, Di Shen, Chenjia Yang, Yanjun Int J Mol Sci Article Auxin response factor (ARF) proteins play roles in plant responses to diverse environmental stresses by binding specifically to the auxin response element in the promoters of target genes. Using our latest public Dendrobium transcriptomes, a comprehensive characterization and analysis of 14 DnARF genes were performed. Three selected DnARFs, including DnARF1, DnARF4, and DnARF6, were confirmed to be nuclear proteins according to their transient expression in epidermal cells of Nicotiana benthamiana leaves. Furthermore, the transcription activation abilities of DnARF1, DnARF4, and DnARF6 were tested in a yeast system. Our data showed that DnARF6 is a transcriptional activator in Dendrobium officinale. To uncover the basic information of DnARF gene responses to abiotic stresses, we analyzed their expression patterns under various hormones and abiotic treatments. Based on our data, several hormones and significant stress responsive DnARF genes have been identified. Since auxin and ARF genes have been identified in many plant species, our data is imperative to reveal the function of ARF mediated auxin signaling in the adaptation to the challenging Dendrobium environment. MDPI 2017-05-04 /pmc/articles/PMC5454840/ /pubmed/28471373 http://dx.doi.org/10.3390/ijms18050927 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Chen, Zhehao Yuan, Ye Fu, Di Shen, Chenjia Yang, Yanjun Identification and Expression Profiling of the Auxin Response Factors in Dendrobium officinale under Abiotic Stresses |
title | Identification and Expression Profiling of the Auxin Response Factors in Dendrobium officinale under Abiotic Stresses |
title_full | Identification and Expression Profiling of the Auxin Response Factors in Dendrobium officinale under Abiotic Stresses |
title_fullStr | Identification and Expression Profiling of the Auxin Response Factors in Dendrobium officinale under Abiotic Stresses |
title_full_unstemmed | Identification and Expression Profiling of the Auxin Response Factors in Dendrobium officinale under Abiotic Stresses |
title_short | Identification and Expression Profiling of the Auxin Response Factors in Dendrobium officinale under Abiotic Stresses |
title_sort | identification and expression profiling of the auxin response factors in dendrobium officinale under abiotic stresses |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5454840/ https://www.ncbi.nlm.nih.gov/pubmed/28471373 http://dx.doi.org/10.3390/ijms18050927 |
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