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Identification and Expression Profiling of the Auxin Response Factors in Dendrobium officinale under Abiotic Stresses

Auxin response factor (ARF) proteins play roles in plant responses to diverse environmental stresses by binding specifically to the auxin response element in the promoters of target genes. Using our latest public Dendrobium transcriptomes, a comprehensive characterization and analysis of 14 DnARF ge...

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Autores principales: Chen, Zhehao, Yuan, Ye, Fu, Di, Shen, Chenjia, Yang, Yanjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5454840/
https://www.ncbi.nlm.nih.gov/pubmed/28471373
http://dx.doi.org/10.3390/ijms18050927
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author Chen, Zhehao
Yuan, Ye
Fu, Di
Shen, Chenjia
Yang, Yanjun
author_facet Chen, Zhehao
Yuan, Ye
Fu, Di
Shen, Chenjia
Yang, Yanjun
author_sort Chen, Zhehao
collection PubMed
description Auxin response factor (ARF) proteins play roles in plant responses to diverse environmental stresses by binding specifically to the auxin response element in the promoters of target genes. Using our latest public Dendrobium transcriptomes, a comprehensive characterization and analysis of 14 DnARF genes were performed. Three selected DnARFs, including DnARF1, DnARF4, and DnARF6, were confirmed to be nuclear proteins according to their transient expression in epidermal cells of Nicotiana benthamiana leaves. Furthermore, the transcription activation abilities of DnARF1, DnARF4, and DnARF6 were tested in a yeast system. Our data showed that DnARF6 is a transcriptional activator in Dendrobium officinale. To uncover the basic information of DnARF gene responses to abiotic stresses, we analyzed their expression patterns under various hormones and abiotic treatments. Based on our data, several hormones and significant stress responsive DnARF genes have been identified. Since auxin and ARF genes have been identified in many plant species, our data is imperative to reveal the function of ARF mediated auxin signaling in the adaptation to the challenging Dendrobium environment.
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spelling pubmed-54548402017-06-08 Identification and Expression Profiling of the Auxin Response Factors in Dendrobium officinale under Abiotic Stresses Chen, Zhehao Yuan, Ye Fu, Di Shen, Chenjia Yang, Yanjun Int J Mol Sci Article Auxin response factor (ARF) proteins play roles in plant responses to diverse environmental stresses by binding specifically to the auxin response element in the promoters of target genes. Using our latest public Dendrobium transcriptomes, a comprehensive characterization and analysis of 14 DnARF genes were performed. Three selected DnARFs, including DnARF1, DnARF4, and DnARF6, were confirmed to be nuclear proteins according to their transient expression in epidermal cells of Nicotiana benthamiana leaves. Furthermore, the transcription activation abilities of DnARF1, DnARF4, and DnARF6 were tested in a yeast system. Our data showed that DnARF6 is a transcriptional activator in Dendrobium officinale. To uncover the basic information of DnARF gene responses to abiotic stresses, we analyzed their expression patterns under various hormones and abiotic treatments. Based on our data, several hormones and significant stress responsive DnARF genes have been identified. Since auxin and ARF genes have been identified in many plant species, our data is imperative to reveal the function of ARF mediated auxin signaling in the adaptation to the challenging Dendrobium environment. MDPI 2017-05-04 /pmc/articles/PMC5454840/ /pubmed/28471373 http://dx.doi.org/10.3390/ijms18050927 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Chen, Zhehao
Yuan, Ye
Fu, Di
Shen, Chenjia
Yang, Yanjun
Identification and Expression Profiling of the Auxin Response Factors in Dendrobium officinale under Abiotic Stresses
title Identification and Expression Profiling of the Auxin Response Factors in Dendrobium officinale under Abiotic Stresses
title_full Identification and Expression Profiling of the Auxin Response Factors in Dendrobium officinale under Abiotic Stresses
title_fullStr Identification and Expression Profiling of the Auxin Response Factors in Dendrobium officinale under Abiotic Stresses
title_full_unstemmed Identification and Expression Profiling of the Auxin Response Factors in Dendrobium officinale under Abiotic Stresses
title_short Identification and Expression Profiling of the Auxin Response Factors in Dendrobium officinale under Abiotic Stresses
title_sort identification and expression profiling of the auxin response factors in dendrobium officinale under abiotic stresses
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5454840/
https://www.ncbi.nlm.nih.gov/pubmed/28471373
http://dx.doi.org/10.3390/ijms18050927
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