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Effects of the CO(2) Guest Molecule on the sI Clathrate Hydrate Structure
This paper analyzes the structural, energetic and mechanical properties of carbon dioxide hydrate clathrates calculated using finite cluster and periodic ab initio density-functional theory methodologies. Intermolecular interactions are described by the exchange-hole dipole moment method. The stabil...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5457105/ https://www.ncbi.nlm.nih.gov/pubmed/28773898 http://dx.doi.org/10.3390/ma9090777 |
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author | Izquierdo-Ruiz, Fernando Otero-de-la-Roza, Alberto Contreras-García, Julia Prieto-Ballesteros, Olga Recio, Jose Manuel |
author_facet | Izquierdo-Ruiz, Fernando Otero-de-la-Roza, Alberto Contreras-García, Julia Prieto-Ballesteros, Olga Recio, Jose Manuel |
author_sort | Izquierdo-Ruiz, Fernando |
collection | PubMed |
description | This paper analyzes the structural, energetic and mechanical properties of carbon dioxide hydrate clathrates calculated using finite cluster and periodic ab initio density-functional theory methodologies. Intermolecular interactions are described by the exchange-hole dipole moment method. The stability, gas saturation energetics, guest–host interactions, cage deformations, vibrational frequencies, and equation of state parameters for the low-pressure sI cubic phase of the CO(2)@H(2)O clathrate hydrate are presented. Our results reveal that: (i) the gas saturation process energetically favors complete filling; (ii) carbon dioxide molecules prefer to occupy the larger of the two cages in the sI structure; (iii) blue shifts occur in both the symmetric and antisymmetric stretching frequencies of CO(2) upon encapsulation; and (iv) free rotation of guest molecules is restricted to a plane parallel to the hexagonal faces of the large cages. In addition, we calculate the librational frequency of the hindered rotation of the guest molecule in the plane perpendicular to the hexagonal faces. Our calculated spectroscopic data can be used as signatures for the detection of clathrate hydrates in planetary environments. |
format | Online Article Text |
id | pubmed-5457105 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-54571052017-07-28 Effects of the CO(2) Guest Molecule on the sI Clathrate Hydrate Structure Izquierdo-Ruiz, Fernando Otero-de-la-Roza, Alberto Contreras-García, Julia Prieto-Ballesteros, Olga Recio, Jose Manuel Materials (Basel) Article This paper analyzes the structural, energetic and mechanical properties of carbon dioxide hydrate clathrates calculated using finite cluster and periodic ab initio density-functional theory methodologies. Intermolecular interactions are described by the exchange-hole dipole moment method. The stability, gas saturation energetics, guest–host interactions, cage deformations, vibrational frequencies, and equation of state parameters for the low-pressure sI cubic phase of the CO(2)@H(2)O clathrate hydrate are presented. Our results reveal that: (i) the gas saturation process energetically favors complete filling; (ii) carbon dioxide molecules prefer to occupy the larger of the two cages in the sI structure; (iii) blue shifts occur in both the symmetric and antisymmetric stretching frequencies of CO(2) upon encapsulation; and (iv) free rotation of guest molecules is restricted to a plane parallel to the hexagonal faces of the large cages. In addition, we calculate the librational frequency of the hindered rotation of the guest molecule in the plane perpendicular to the hexagonal faces. Our calculated spectroscopic data can be used as signatures for the detection of clathrate hydrates in planetary environments. MDPI 2016-09-15 /pmc/articles/PMC5457105/ /pubmed/28773898 http://dx.doi.org/10.3390/ma9090777 Text en © 2016 by the authors; Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Izquierdo-Ruiz, Fernando Otero-de-la-Roza, Alberto Contreras-García, Julia Prieto-Ballesteros, Olga Recio, Jose Manuel Effects of the CO(2) Guest Molecule on the sI Clathrate Hydrate Structure |
title | Effects of the CO(2) Guest Molecule on the sI Clathrate Hydrate Structure |
title_full | Effects of the CO(2) Guest Molecule on the sI Clathrate Hydrate Structure |
title_fullStr | Effects of the CO(2) Guest Molecule on the sI Clathrate Hydrate Structure |
title_full_unstemmed | Effects of the CO(2) Guest Molecule on the sI Clathrate Hydrate Structure |
title_short | Effects of the CO(2) Guest Molecule on the sI Clathrate Hydrate Structure |
title_sort | effects of the co(2) guest molecule on the si clathrate hydrate structure |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5457105/ https://www.ncbi.nlm.nih.gov/pubmed/28773898 http://dx.doi.org/10.3390/ma9090777 |
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