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A potentially functional variant of ARID1B interacts with physical activity in association with risk of hepatocellular carcinoma
The tumor suppressor role of AT-rich interactive domain containing protein 1B (ARID1B) has drawn much attention in area of cancer etiology. However, it had remained unknown whether or not genetic variants of ARID1B involved in development of hepatocellular carcinoma (HCC). In this study, three putat...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5458188/ https://www.ncbi.nlm.nih.gov/pubmed/28415691 http://dx.doi.org/10.18632/oncotarget.16074 |
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author | Liu, Li Tian, Nana Zhou, Chengyu Lin, Xinqi Lv, Weibiao Lin, Zhifeng Lin, Zibo Qi, Yongfen Yang, Yi Chen, Sidong Yu, Xinfa Gao, Yanhui |
author_facet | Liu, Li Tian, Nana Zhou, Chengyu Lin, Xinqi Lv, Weibiao Lin, Zhifeng Lin, Zibo Qi, Yongfen Yang, Yi Chen, Sidong Yu, Xinfa Gao, Yanhui |
author_sort | Liu, Li |
collection | PubMed |
description | The tumor suppressor role of AT-rich interactive domain containing protein 1B (ARID1B) has drawn much attention in area of cancer etiology. However, it had remained unknown whether or not genetic variants of ARID1B involved in development of hepatocellular carcinoma (HCC). In this study, three putatively functional variants in ARID1B (rs73013281C>T, rs167007A>G, and rs9397984C>T) were selected using bioinformatics tools, and a case-control study of 611 cases and 614 controls was conducted to investigate genetic associations with HCC risk in a Southern Chinese population. Two-dimensional gene-environment interactions were also explored using both multiplicative and additive scales. A dominant effect of the rs73013281 was found for HCC risk, with an adjusted odds ratio (OR) of 1.70 [95% confidence interval (CI) = 1.03−2.80] for the CT/TT genotypes compared to the CC genotype. In stratified analysis, the detrimental effect of the T allele on elevated HCC risk was attenuated by physical activity, with an adjusted OR of 2.75 (95% CI = 1.39−5.41) among inactive individuals against that of 0.89 (95% CI = 0.42−1.91) in those who exercised regularly. Expectably, the rs73013281 showed both multiplicative and additive interactions with physical activity (P = 0.037 and 0.006, respectively). In conclusion, these results highlighted the significant genetic contribution of the ARID1B variant, rs73013281, to susceptibility for HCC, especially in interaction with physical activity. |
format | Online Article Text |
id | pubmed-5458188 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-54581882017-06-08 A potentially functional variant of ARID1B interacts with physical activity in association with risk of hepatocellular carcinoma Liu, Li Tian, Nana Zhou, Chengyu Lin, Xinqi Lv, Weibiao Lin, Zhifeng Lin, Zibo Qi, Yongfen Yang, Yi Chen, Sidong Yu, Xinfa Gao, Yanhui Oncotarget Research Paper The tumor suppressor role of AT-rich interactive domain containing protein 1B (ARID1B) has drawn much attention in area of cancer etiology. However, it had remained unknown whether or not genetic variants of ARID1B involved in development of hepatocellular carcinoma (HCC). In this study, three putatively functional variants in ARID1B (rs73013281C>T, rs167007A>G, and rs9397984C>T) were selected using bioinformatics tools, and a case-control study of 611 cases and 614 controls was conducted to investigate genetic associations with HCC risk in a Southern Chinese population. Two-dimensional gene-environment interactions were also explored using both multiplicative and additive scales. A dominant effect of the rs73013281 was found for HCC risk, with an adjusted odds ratio (OR) of 1.70 [95% confidence interval (CI) = 1.03−2.80] for the CT/TT genotypes compared to the CC genotype. In stratified analysis, the detrimental effect of the T allele on elevated HCC risk was attenuated by physical activity, with an adjusted OR of 2.75 (95% CI = 1.39−5.41) among inactive individuals against that of 0.89 (95% CI = 0.42−1.91) in those who exercised regularly. Expectably, the rs73013281 showed both multiplicative and additive interactions with physical activity (P = 0.037 and 0.006, respectively). In conclusion, these results highlighted the significant genetic contribution of the ARID1B variant, rs73013281, to susceptibility for HCC, especially in interaction with physical activity. Impact Journals LLC 2017-03-10 /pmc/articles/PMC5458188/ /pubmed/28415691 http://dx.doi.org/10.18632/oncotarget.16074 Text en Copyright: © 2017 Liu et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) (CC-BY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Liu, Li Tian, Nana Zhou, Chengyu Lin, Xinqi Lv, Weibiao Lin, Zhifeng Lin, Zibo Qi, Yongfen Yang, Yi Chen, Sidong Yu, Xinfa Gao, Yanhui A potentially functional variant of ARID1B interacts with physical activity in association with risk of hepatocellular carcinoma |
title | A potentially functional variant of ARID1B interacts with physical activity in association with risk of hepatocellular carcinoma |
title_full | A potentially functional variant of ARID1B interacts with physical activity in association with risk of hepatocellular carcinoma |
title_fullStr | A potentially functional variant of ARID1B interacts with physical activity in association with risk of hepatocellular carcinoma |
title_full_unstemmed | A potentially functional variant of ARID1B interacts with physical activity in association with risk of hepatocellular carcinoma |
title_short | A potentially functional variant of ARID1B interacts with physical activity in association with risk of hepatocellular carcinoma |
title_sort | potentially functional variant of arid1b interacts with physical activity in association with risk of hepatocellular carcinoma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5458188/ https://www.ncbi.nlm.nih.gov/pubmed/28415691 http://dx.doi.org/10.18632/oncotarget.16074 |
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