Cargando…

An atypical phosphodiesterase capable of degrading haloalkyl phosphate diesters from Sphingobium sp. strain TCM1

Sphingobium sp. strain TCM1 can degrade tris(2-chloroethyl) phosphate (TCEP) to inorganic phosphate and 2-chloroethanol. A phosphotriesterase (PTE), phosphodiesterase (PDE) and phosphomonoesterase (PME) are believed to be involved in the degradation of TCEP. The PTE and PME that respectively catalyz...

Descripción completa

Detalles Bibliográficos
Autores principales: Abe, Katsumasa, Mukai, Naoko, Morooka, Yuka, Makino, Takeshi, Oshima, Kenji, Takahashi, Shouji, Kera, Yoshio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5460133/
https://www.ncbi.nlm.nih.gov/pubmed/28588250
http://dx.doi.org/10.1038/s41598-017-03142-9
_version_ 1783242101428846592
author Abe, Katsumasa
Mukai, Naoko
Morooka, Yuka
Makino, Takeshi
Oshima, Kenji
Takahashi, Shouji
Kera, Yoshio
author_facet Abe, Katsumasa
Mukai, Naoko
Morooka, Yuka
Makino, Takeshi
Oshima, Kenji
Takahashi, Shouji
Kera, Yoshio
author_sort Abe, Katsumasa
collection PubMed
description Sphingobium sp. strain TCM1 can degrade tris(2-chloroethyl) phosphate (TCEP) to inorganic phosphate and 2-chloroethanol. A phosphotriesterase (PTE), phosphodiesterase (PDE) and phosphomonoesterase (PME) are believed to be involved in the degradation of TCEP. The PTE and PME that respectively catalyze the first and third steps of TCEP degradation in TCM1 have been identified. However, no information has been reported on a PDE catalyzing the second step. In this study, we identified, purified, and characterized a PDE capable of hydrolyzing haloalkyl phosphate diesters. The final preparation of the enzyme had a specific activity of 29 µmol min(−1) mg(−1) with bis(p-nitrophenyl) phosphate (BpNPP) as the substrate. It also possessed low PME activity with p-nitrophenyl phosphate (pNPP) as substrate. The catalytic efficiency (k (cat)/K (m)) with BpNPP was significantly higher than that with pNPP, indicating that the enzyme prefers the organophosphorus diester to the monoester. The enzyme degraded bis(2,3-dibromopropyl) phosphate, bis(1,3-dichloro-2-propyl) phosphate and bis(2-chloroethyl) phosphate, suggesting that it is involved in the metabolism of haloalkyl organophosphorus triesters. The primary structure of the PDE from TCM1 is distinct from those of typical PDE family members and the enzyme belongs to the polymerase and histidinol phosphatase superfamily.
format Online
Article
Text
id pubmed-5460133
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-54601332017-06-06 An atypical phosphodiesterase capable of degrading haloalkyl phosphate diesters from Sphingobium sp. strain TCM1 Abe, Katsumasa Mukai, Naoko Morooka, Yuka Makino, Takeshi Oshima, Kenji Takahashi, Shouji Kera, Yoshio Sci Rep Article Sphingobium sp. strain TCM1 can degrade tris(2-chloroethyl) phosphate (TCEP) to inorganic phosphate and 2-chloroethanol. A phosphotriesterase (PTE), phosphodiesterase (PDE) and phosphomonoesterase (PME) are believed to be involved in the degradation of TCEP. The PTE and PME that respectively catalyze the first and third steps of TCEP degradation in TCM1 have been identified. However, no information has been reported on a PDE catalyzing the second step. In this study, we identified, purified, and characterized a PDE capable of hydrolyzing haloalkyl phosphate diesters. The final preparation of the enzyme had a specific activity of 29 µmol min(−1) mg(−1) with bis(p-nitrophenyl) phosphate (BpNPP) as the substrate. It also possessed low PME activity with p-nitrophenyl phosphate (pNPP) as substrate. The catalytic efficiency (k (cat)/K (m)) with BpNPP was significantly higher than that with pNPP, indicating that the enzyme prefers the organophosphorus diester to the monoester. The enzyme degraded bis(2,3-dibromopropyl) phosphate, bis(1,3-dichloro-2-propyl) phosphate and bis(2-chloroethyl) phosphate, suggesting that it is involved in the metabolism of haloalkyl organophosphorus triesters. The primary structure of the PDE from TCM1 is distinct from those of typical PDE family members and the enzyme belongs to the polymerase and histidinol phosphatase superfamily. Nature Publishing Group UK 2017-06-06 /pmc/articles/PMC5460133/ /pubmed/28588250 http://dx.doi.org/10.1038/s41598-017-03142-9 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Abe, Katsumasa
Mukai, Naoko
Morooka, Yuka
Makino, Takeshi
Oshima, Kenji
Takahashi, Shouji
Kera, Yoshio
An atypical phosphodiesterase capable of degrading haloalkyl phosphate diesters from Sphingobium sp. strain TCM1
title An atypical phosphodiesterase capable of degrading haloalkyl phosphate diesters from Sphingobium sp. strain TCM1
title_full An atypical phosphodiesterase capable of degrading haloalkyl phosphate diesters from Sphingobium sp. strain TCM1
title_fullStr An atypical phosphodiesterase capable of degrading haloalkyl phosphate diesters from Sphingobium sp. strain TCM1
title_full_unstemmed An atypical phosphodiesterase capable of degrading haloalkyl phosphate diesters from Sphingobium sp. strain TCM1
title_short An atypical phosphodiesterase capable of degrading haloalkyl phosphate diesters from Sphingobium sp. strain TCM1
title_sort atypical phosphodiesterase capable of degrading haloalkyl phosphate diesters from sphingobium sp. strain tcm1
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5460133/
https://www.ncbi.nlm.nih.gov/pubmed/28588250
http://dx.doi.org/10.1038/s41598-017-03142-9
work_keys_str_mv AT abekatsumasa anatypicalphosphodiesterasecapableofdegradinghaloalkylphosphatediestersfromsphingobiumspstraintcm1
AT mukainaoko anatypicalphosphodiesterasecapableofdegradinghaloalkylphosphatediestersfromsphingobiumspstraintcm1
AT morookayuka anatypicalphosphodiesterasecapableofdegradinghaloalkylphosphatediestersfromsphingobiumspstraintcm1
AT makinotakeshi anatypicalphosphodiesterasecapableofdegradinghaloalkylphosphatediestersfromsphingobiumspstraintcm1
AT oshimakenji anatypicalphosphodiesterasecapableofdegradinghaloalkylphosphatediestersfromsphingobiumspstraintcm1
AT takahashishouji anatypicalphosphodiesterasecapableofdegradinghaloalkylphosphatediestersfromsphingobiumspstraintcm1
AT kerayoshio anatypicalphosphodiesterasecapableofdegradinghaloalkylphosphatediestersfromsphingobiumspstraintcm1
AT abekatsumasa atypicalphosphodiesterasecapableofdegradinghaloalkylphosphatediestersfromsphingobiumspstraintcm1
AT mukainaoko atypicalphosphodiesterasecapableofdegradinghaloalkylphosphatediestersfromsphingobiumspstraintcm1
AT morookayuka atypicalphosphodiesterasecapableofdegradinghaloalkylphosphatediestersfromsphingobiumspstraintcm1
AT makinotakeshi atypicalphosphodiesterasecapableofdegradinghaloalkylphosphatediestersfromsphingobiumspstraintcm1
AT oshimakenji atypicalphosphodiesterasecapableofdegradinghaloalkylphosphatediestersfromsphingobiumspstraintcm1
AT takahashishouji atypicalphosphodiesterasecapableofdegradinghaloalkylphosphatediestersfromsphingobiumspstraintcm1
AT kerayoshio atypicalphosphodiesterasecapableofdegradinghaloalkylphosphatediestersfromsphingobiumspstraintcm1