Cargando…

Population genetics analysis of the Nujiang catfish Creteuchiloglanis macropterus through a genome-wide single nucleotide polymorphisms resource generated by RAD-seq

Advances in genome scanning using high-throughput sequencing technologies has led to a revolution in studies of non-model organisms. The glyptosternoid fish Creteuchiloglanis macropterus, is widely distributed in the main stem and tributaries of the Nujiang River basin. Here, we analyzed IIB restric...

Descripción completa

Detalles Bibliográficos
Autores principales:	Kang, Jingliang, Ma, Xiuhui, He, Shunping
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2017
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5460224/ https://www.ncbi.nlm.nih.gov/pubmed/28588195 http://dx.doi.org/10.1038/s41598-017-02853-3

Ejemplares similares

Author Correction: Population genetics analysis of the Nujiang catfish Creteuchiloglanis macropterus through a genome-wide single nucleotide polymorphisms resource generated by RAD-seq
por: Kang, Jingliang, et al.
Publicado: (2018)

Evidence of high-altitude adaptation in the glyptosternoid fish, Creteuchiloglanis macropterus from the Nujiang River obtained through transcriptome analysis
por: Kang, Jingliang, et al.
Publicado: (2017)

Chromosome-level genome assembly of the largefin longbarbel catfish (Hemibagrus macropterus)
por: Ye, Huan, et al.
Publicado: (2023)

The fish diversity in the upper reaches of the Salween River, Nujiang River, revealed by DNA barcoding
por: Chen, Weitao, et al.
Publicado: (2015)

Comprehensive Transcriptome Analysis of Six Catfish Species from an Altitude Gradient Reveals Adaptive Evolution in Tibetan Fishes
por: Ma, Xiuhui, et al.
Publicado: (2015)

Genetic differentiation of the Schizothorax species complex (Cyprinidae) in the Nujiang River (upper Salween)
por: Chen, Weitao, et al.
Publicado: (2017)

Developing Single Nucleotide Polymorphisms for Identification of Cod Products by RAD-Seq
por: Jiang, Shoujia, et al.
Publicado: (2020)

The complete mitochondrial genome of Archamia macropterus (Perciformes; Apogonidae) and phylogenetic studies of Perciformes
por: Pan, Yun, et al.
Publicado: (2019)

Evaluation of Landslide Susceptibility Based on CF-SVM in Nujiang Prefecture
por: Li, Yimin, et al.
Publicado: (2022)

The Upper Triassic deposits of the west Bangong-Nujiang suture zone and their paleogeographic implications
por: Wu, Guichun, et al.
Publicado: (2021)

Constructing the Ecological Security Pattern of Nujiang Prefecture Based on the Framework of “Importance–Sensitivity–Connectivity”
por: Li, Yimin, et al.
Publicado: (2022)

Genome assembly and isoform analysis of a highly heterozygous New Zealand fisheries species, the tarakihi (Nemadactylus macropterus)
por: Papa, Yvan, et al.
Publicado: (2022)

Biogeographic history and high-elevation adaptations inferred from the mitochondrial genome of Glyptosternoid fishes (Sisoridae, Siluriformes) from the southeastern Tibetan Plateau
por: Ma, Xiuhui, et al.
Publicado: (2015)

Analyses of single nucleotide polymorphisms identified by ddRAD-seq reveal genetic structure of tea germplasm and Japanese landraces for tea breeding
por: Yamashita, Hiroto, et al.
Publicado: (2019)

The complete mitochondrial genome of Percocypris retrodorsalis (Teleostei, Cypriniformes) in Nujiang River: characterization and phylogenetic position
por: Xiong, Xiao-Qin, et al.
Publicado: (2020)

Bayesian Divergence-Time Estimation with Genome-Wide Single-Nucleotide Polymorphism Data of Sea Catfishes (Ariidae) Supports Miocene Closure of the Panamanian Isthmus
por: Stange, Madlen, et al.
Publicado: (2018)

MIG-seq: an effective PCR-based method for genome-wide single-nucleotide polymorphism genotyping using the next-generation sequencing platform
por: Suyama, Yoshihisa, et al.
Publicado: (2015)

Towards the ictalurid catfish transcriptome: generation and analysis of 31,215 catfish ESTs
por: Li, Ping, et al.
Publicado: (2007)

Development of a Genomic Resource and Identification of Nucleotide Diversity of Yellow Perch by RAD Sequencing
por: Guo, Liang, et al.
Publicado: (2019)

A Biocultural Study on Gaoligongshan Pig (Sus scrofa domesticus), an Important Hog Landrace, in Nujiang Prefecture of China
por: Chu, Yanan, et al.
Publicado: (2022)

Genome-Wide Population Structure and Selection Signatures of Yunling Goat Based on RAD-seq
por: Chen, Yuming, et al.
Publicado: (2022)

DNA Barcoding of Catfish: Species Authentication and Phylogenetic Assessment
por: Wong, Li Lian, et al.
Publicado: (2011)

Using MiddRAD-seq data to develop polymorphic microsatellite markers for an endangered yew species
por: Qin, Hantao, et al.
Publicado: (2017)

ATP half‐sites in RadA and RAD51 recombinases bind nucleotides
por: Marsh, May E., et al.
Publicado: (2016)

Male-Biased Genes in Catfish as Revealed by RNA-Seq Analysis of the Testis Transcriptome
por: Sun, Fanyue, et al.
Publicado: (2013)

Single nucleotide polymorphism discovery in bovine liver using RNA-seq technology
por: Pareek, Chandra Shekhar, et al.
Publicado: (2017)

Exploring the genomic resources and analysing the genetic diversity and population structure of Chinese indigenous rabbit breeds by RAD-seq
por: Liu, Chenmiao, et al.
Publicado: (2021)

Identification of Multi-Dimensional Relative Poverty and Governance Path at the Village Scale in an Alpine-Gorge Region: A Case Study in Nujiang, China
por: Gu, Zexian, et al.
Publicado: (2023)

Genome-Wide Patterns of Nucleotide Polymorphism in Domesticated Rice
por: Caicedo, Ana L, et al.
Publicado: (2007)

DiscoSnp-RAD: de novo detection of small variants for RAD-Seq population genomics
por: Gauthier, Jérémy, et al.
Publicado: (2020)

RADIS: analysis of RAD-seq data for interspecific phylogeny
por: Cruaud, Astrid, et al.
Publicado: (2016)

Cryo-EM structure of TFIIH/Rad4–Rad23–Rad33 in damaged DNA opening in nucleotide excision repair
por: van Eeuwen, Trevor, et al.
Publicado: (2021)

Quality control method for RNA-seq using single nucleotide polymorphism allele frequency
por: Endo, Takaho A
Publicado: (2014)

Single Nucleotide Polymorphism Discovery in Bovine Pituitary Gland Using RNA-Seq Technology
por: Pareek, Chandra Shekhar, et al.
Publicado: (2016)

Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote
por: Liu, Shikai, et al.
Publicado: (2012)

Genome-wide single nucleotide polymorphism analyses on rheumatoid arthritis
por: Yamamoto, K, et al.
Publicado: (2004)

A Polar and Nucleotide-Dependent Mechanism of Action for RAD51 Paralogs in RAD51 Filament Remodeling
por: Taylor, Martin R.G., et al.
Publicado: (2016)

Nucleotide proofreading functions by nematode RAD51 paralogs facilitate optimal RAD51 filament function
por: Špírek, Mário, et al.
Publicado: (2021)

Diversification of chiles (Capsicum, Solanaceae) through time and space: New insights from genome-wide RAD-seq data
por: Carrizo García, Carolina, et al.
Publicado: (2022)

Is RAD-seq suitable for phylogenetic inference? An in silico assessment and optimization
por: Cariou, Marie, et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_i9unnmt0orrilu7ga3dhu8ioh9