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Revealing region-specific biofilm viscoelastic properties by means of a micro-rheological approach
Particle-tracking microrheology is an in situ technique that allows quantification of biofilm material properties. It overcomes the limitations of alternative techniques such as bulk rheology or force spectroscopy by providing data on region specific material properties at any required biofilm locat...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5460257/ https://www.ncbi.nlm.nih.gov/pubmed/28649399 http://dx.doi.org/10.1038/s41522-016-0005-y |
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author | Cao, Huayu Habimana, Olivier Safari, Ashkan Heffernan, Rory Dai, Yihong Casey, Eoin |
author_facet | Cao, Huayu Habimana, Olivier Safari, Ashkan Heffernan, Rory Dai, Yihong Casey, Eoin |
author_sort | Cao, Huayu |
collection | PubMed |
description | Particle-tracking microrheology is an in situ technique that allows quantification of biofilm material properties. It overcomes the limitations of alternative techniques such as bulk rheology or force spectroscopy by providing data on region specific material properties at any required biofilm location and can be combined with confocal microscopy and associated structural analysis. This article describes single particle tracking microrheology combined with confocal laser scanning microscopy to resolve the biofilm structure in 3 dimensions and calculate the creep compliances locally. Samples were analysed from Pseudomonas fluorescens biofilms that were cultivated over two timescales (24 h and 48 h) and alternate ionic conditions (with and without calcium chloride supplementation). The region-based creep compliance analysis showed that the creep compliance of biofilm void zones is the primary contributor to biofilm mechanical properties, contributing to the overall viscoelastic character. |
format | Online Article Text |
id | pubmed-5460257 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-54602572017-06-23 Revealing region-specific biofilm viscoelastic properties by means of a micro-rheological approach Cao, Huayu Habimana, Olivier Safari, Ashkan Heffernan, Rory Dai, Yihong Casey, Eoin NPJ Biofilms Microbiomes Article Particle-tracking microrheology is an in situ technique that allows quantification of biofilm material properties. It overcomes the limitations of alternative techniques such as bulk rheology or force spectroscopy by providing data on region specific material properties at any required biofilm location and can be combined with confocal microscopy and associated structural analysis. This article describes single particle tracking microrheology combined with confocal laser scanning microscopy to resolve the biofilm structure in 3 dimensions and calculate the creep compliances locally. Samples were analysed from Pseudomonas fluorescens biofilms that were cultivated over two timescales (24 h and 48 h) and alternate ionic conditions (with and without calcium chloride supplementation). The region-based creep compliance analysis showed that the creep compliance of biofilm void zones is the primary contributor to biofilm mechanical properties, contributing to the overall viscoelastic character. Nature Publishing Group UK 2016-12-05 /pmc/articles/PMC5460257/ /pubmed/28649399 http://dx.doi.org/10.1038/s41522-016-0005-y Text en © The Author(s) 2016 This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Cao, Huayu Habimana, Olivier Safari, Ashkan Heffernan, Rory Dai, Yihong Casey, Eoin Revealing region-specific biofilm viscoelastic properties by means of a micro-rheological approach |
title | Revealing region-specific biofilm viscoelastic properties by means of a micro-rheological approach |
title_full | Revealing region-specific biofilm viscoelastic properties by means of a micro-rheological approach |
title_fullStr | Revealing region-specific biofilm viscoelastic properties by means of a micro-rheological approach |
title_full_unstemmed | Revealing region-specific biofilm viscoelastic properties by means of a micro-rheological approach |
title_short | Revealing region-specific biofilm viscoelastic properties by means of a micro-rheological approach |
title_sort | revealing region-specific biofilm viscoelastic properties by means of a micro-rheological approach |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5460257/ https://www.ncbi.nlm.nih.gov/pubmed/28649399 http://dx.doi.org/10.1038/s41522-016-0005-y |
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