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DATS, the data tag suite to enable discoverability of datasets

Today’s science increasingly requires effective ways to find and access existing datasets that are distributed across a range of repositories. For researchers in the life sciences, discoverability of datasets may soon become as essential as identifying the latest publications via PubMed. Through an...

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Autores principales: Sansone, Susanna-Assunta, Gonzalez-Beltran, Alejandra, Rocca-Serra, Philippe, Alter, George, Grethe, Jeffrey S., Xu, Hua, Fore, Ian M., Lyle, Jared, Gururaj, Anupama E., Chen, Xiaoling, Kim, Hyeon-eui, Zong, Nansu, Li, Yueling, Liu, Ruiling, Ozyurt, I. Burak, Ohno-Machado, Lucila
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5460592/
https://www.ncbi.nlm.nih.gov/pubmed/28585923
http://dx.doi.org/10.1038/sdata.2017.59
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author Sansone, Susanna-Assunta
Gonzalez-Beltran, Alejandra
Rocca-Serra, Philippe
Alter, George
Grethe, Jeffrey S.
Xu, Hua
Fore, Ian M.
Lyle, Jared
Gururaj, Anupama E.
Chen, Xiaoling
Kim, Hyeon-eui
Zong, Nansu
Li, Yueling
Liu, Ruiling
Ozyurt, I. Burak
Ohno-Machado, Lucila
author_facet Sansone, Susanna-Assunta
Gonzalez-Beltran, Alejandra
Rocca-Serra, Philippe
Alter, George
Grethe, Jeffrey S.
Xu, Hua
Fore, Ian M.
Lyle, Jared
Gururaj, Anupama E.
Chen, Xiaoling
Kim, Hyeon-eui
Zong, Nansu
Li, Yueling
Liu, Ruiling
Ozyurt, I. Burak
Ohno-Machado, Lucila
author_sort Sansone, Susanna-Assunta
collection PubMed
description Today’s science increasingly requires effective ways to find and access existing datasets that are distributed across a range of repositories. For researchers in the life sciences, discoverability of datasets may soon become as essential as identifying the latest publications via PubMed. Through an international collaborative effort funded by the National Institutes of Health (NIH)’s Big Data to Knowledge (BD2K) initiative, we have designed and implemented the DAta Tag Suite (DATS) model to support the DataMed data discovery index. DataMed’s goal is to be for data what PubMed has been for the scientific literature. Akin to the Journal Article Tag Suite (JATS) used in PubMed, the DATS model enables submission of metadata on datasets to DataMed. DATS has a core set of elements, which are generic and applicable to any type of dataset, and an extended set that can accommodate more specialized data types. DATS is a platform-independent model also available as an annotated serialization in schema.org, which in turn is widely used by major search engines like Google, Microsoft, Yahoo and Yandex.
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spelling pubmed-54605922017-06-15 DATS, the data tag suite to enable discoverability of datasets Sansone, Susanna-Assunta Gonzalez-Beltran, Alejandra Rocca-Serra, Philippe Alter, George Grethe, Jeffrey S. Xu, Hua Fore, Ian M. Lyle, Jared Gururaj, Anupama E. Chen, Xiaoling Kim, Hyeon-eui Zong, Nansu Li, Yueling Liu, Ruiling Ozyurt, I. Burak Ohno-Machado, Lucila Sci Data Article Today’s science increasingly requires effective ways to find and access existing datasets that are distributed across a range of repositories. For researchers in the life sciences, discoverability of datasets may soon become as essential as identifying the latest publications via PubMed. Through an international collaborative effort funded by the National Institutes of Health (NIH)’s Big Data to Knowledge (BD2K) initiative, we have designed and implemented the DAta Tag Suite (DATS) model to support the DataMed data discovery index. DataMed’s goal is to be for data what PubMed has been for the scientific literature. Akin to the Journal Article Tag Suite (JATS) used in PubMed, the DATS model enables submission of metadata on datasets to DataMed. DATS has a core set of elements, which are generic and applicable to any type of dataset, and an extended set that can accommodate more specialized data types. DATS is a platform-independent model also available as an annotated serialization in schema.org, which in turn is widely used by major search engines like Google, Microsoft, Yahoo and Yandex. Nature Publishing Group 2017-06-06 /pmc/articles/PMC5460592/ /pubmed/28585923 http://dx.doi.org/10.1038/sdata.2017.59 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Sansone, Susanna-Assunta
Gonzalez-Beltran, Alejandra
Rocca-Serra, Philippe
Alter, George
Grethe, Jeffrey S.
Xu, Hua
Fore, Ian M.
Lyle, Jared
Gururaj, Anupama E.
Chen, Xiaoling
Kim, Hyeon-eui
Zong, Nansu
Li, Yueling
Liu, Ruiling
Ozyurt, I. Burak
Ohno-Machado, Lucila
DATS, the data tag suite to enable discoverability of datasets
title DATS, the data tag suite to enable discoverability of datasets
title_full DATS, the data tag suite to enable discoverability of datasets
title_fullStr DATS, the data tag suite to enable discoverability of datasets
title_full_unstemmed DATS, the data tag suite to enable discoverability of datasets
title_short DATS, the data tag suite to enable discoverability of datasets
title_sort dats, the data tag suite to enable discoverability of datasets
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5460592/
https://www.ncbi.nlm.nih.gov/pubmed/28585923
http://dx.doi.org/10.1038/sdata.2017.59
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