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Lack of robustness of textural measures obtained from 3D brain tumor MRIs impose a need for standardization

PURPOSE: Textural measures have been widely explored as imaging biomarkers in cancer. However, their robustness under dynamic range and spatial resolution changes in brain 3D magnetic resonance images (MRI) has not been assessed. The aim of this work was to study potential variations of textural mea...

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Autores principales: Molina, David, Pérez-Beteta, Julián, Martínez-González, Alicia, Martino, Juan, Velasquez, Carlos, Arana, Estanislao, Pérez-García, Víctor M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5460822/
https://www.ncbi.nlm.nih.gov/pubmed/28586353
http://dx.doi.org/10.1371/journal.pone.0178843
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author Molina, David
Pérez-Beteta, Julián
Martínez-González, Alicia
Martino, Juan
Velasquez, Carlos
Arana, Estanislao
Pérez-García, Víctor M.
author_facet Molina, David
Pérez-Beteta, Julián
Martínez-González, Alicia
Martino, Juan
Velasquez, Carlos
Arana, Estanislao
Pérez-García, Víctor M.
author_sort Molina, David
collection PubMed
description PURPOSE: Textural measures have been widely explored as imaging biomarkers in cancer. However, their robustness under dynamic range and spatial resolution changes in brain 3D magnetic resonance images (MRI) has not been assessed. The aim of this work was to study potential variations of textural measures due to changes in MRI protocols. MATERIALS AND METHODS: Twenty patients harboring glioblastoma with pretreatment 3D T1-weighted MRIs were included in the study. Four different spatial resolution combinations and three dynamic ranges were studied for each patient. Sixteen three-dimensional textural heterogeneity measures were computed for each patient and configuration including co-occurrence matrices (CM) features and run-length matrices (RLM) features. The coefficient of variation was used to assess the robustness of the measures in two series of experiments corresponding to (i) changing the dynamic range and (ii) changing the matrix size. RESULTS: No textural measures were robust under dynamic range changes. Entropy was the only textural feature robust under spatial resolution changes (coefficient of variation under 10% in all cases). CONCLUSION: Textural measures of three-dimensional brain tumor images are not robust neither under dynamic range nor under matrix size changes. Standards should be harmonized to use textural features as imaging biomarkers in radiomic-based studies. The implications of this work go beyond the specific tumor type studied here and pose the need for standardization in textural feature calculation of oncological images.
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spelling pubmed-54608222017-06-15 Lack of robustness of textural measures obtained from 3D brain tumor MRIs impose a need for standardization Molina, David Pérez-Beteta, Julián Martínez-González, Alicia Martino, Juan Velasquez, Carlos Arana, Estanislao Pérez-García, Víctor M. PLoS One Research Article PURPOSE: Textural measures have been widely explored as imaging biomarkers in cancer. However, their robustness under dynamic range and spatial resolution changes in brain 3D magnetic resonance images (MRI) has not been assessed. The aim of this work was to study potential variations of textural measures due to changes in MRI protocols. MATERIALS AND METHODS: Twenty patients harboring glioblastoma with pretreatment 3D T1-weighted MRIs were included in the study. Four different spatial resolution combinations and three dynamic ranges were studied for each patient. Sixteen three-dimensional textural heterogeneity measures were computed for each patient and configuration including co-occurrence matrices (CM) features and run-length matrices (RLM) features. The coefficient of variation was used to assess the robustness of the measures in two series of experiments corresponding to (i) changing the dynamic range and (ii) changing the matrix size. RESULTS: No textural measures were robust under dynamic range changes. Entropy was the only textural feature robust under spatial resolution changes (coefficient of variation under 10% in all cases). CONCLUSION: Textural measures of three-dimensional brain tumor images are not robust neither under dynamic range nor under matrix size changes. Standards should be harmonized to use textural features as imaging biomarkers in radiomic-based studies. The implications of this work go beyond the specific tumor type studied here and pose the need for standardization in textural feature calculation of oncological images. Public Library of Science 2017-06-06 /pmc/articles/PMC5460822/ /pubmed/28586353 http://dx.doi.org/10.1371/journal.pone.0178843 Text en © 2017 Molina et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Molina, David
Pérez-Beteta, Julián
Martínez-González, Alicia
Martino, Juan
Velasquez, Carlos
Arana, Estanislao
Pérez-García, Víctor M.
Lack of robustness of textural measures obtained from 3D brain tumor MRIs impose a need for standardization
title Lack of robustness of textural measures obtained from 3D brain tumor MRIs impose a need for standardization
title_full Lack of robustness of textural measures obtained from 3D brain tumor MRIs impose a need for standardization
title_fullStr Lack of robustness of textural measures obtained from 3D brain tumor MRIs impose a need for standardization
title_full_unstemmed Lack of robustness of textural measures obtained from 3D brain tumor MRIs impose a need for standardization
title_short Lack of robustness of textural measures obtained from 3D brain tumor MRIs impose a need for standardization
title_sort lack of robustness of textural measures obtained from 3d brain tumor mris impose a need for standardization
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5460822/
https://www.ncbi.nlm.nih.gov/pubmed/28586353
http://dx.doi.org/10.1371/journal.pone.0178843
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