Cargando…

Characterization, Genomic Organization, Abundance, and Chromosomal Distribution of Ty1-copia Retrotransposons in Erianthus arundinaceus

Erianthus arundinaceus is an important wild species of the genus Saccharum with many valuable traits. However, the composition and structure of its genome are largely unknown, which have hindered its utilization in sugarcane breeding and evolutionary research. Retrotransposons constitute an apprecia...

Descripción completa

Detalles Bibliográficos
Autores principales:	Huang, Yongji, Luo, Ling, Hu, Xuguang, Yu, Fan, Yang, Yongqing, Deng, Zuhu, Wu, Jiayun, Chen, Rukai, Zhang, Muqing
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2017
Materias:	Plant Science
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5461294/ https://www.ncbi.nlm.nih.gov/pubmed/28638390 http://dx.doi.org/10.3389/fpls.2017.00924

Ejemplares similares

Unexpected Inheritance Pattern of Erianthus arundinaceus Chromosomes in the Intergeneric Progeny between Saccharum spp. and Erianthus arundinaceus
por: Wu, Jiayun, et al.
Publicado: (2014)

Characterization of Chromosome Inheritance of the Intergeneric BC(2) and BC(3) Progeny between Saccharum spp. and Erianthus arundinaceus
por: Huang, Yongji, et al.
Publicado: (2015)

Chromosome transmission in BC(4) progenies of intergeneric hybrids between Saccharum spp. and Erianthus arundinaceus (Retz.) Jeswiet
por: Yang, Shan, et al.
Publicado: (2019)

An improved suppression subtractive hybridization technique to develop species-specific repetitive sequences from Erianthus arundinaceus (Saccharum complex)
por: Yu, Fan, et al.
Publicado: (2018)

Efficient Anchoring of Erianthus arundinaceus Chromatin Introgressed into Sugarcane by Specific Molecular Markers
por: Wu, Jiayun, et al.
Publicado: (2022)

Chromosome behavior during meiosis in pollen mother cells from Saccharum officinarum × Erianthus arundinaceus F(1) hybrids
por: Li, Xueting, et al.
Publicado: (2021)

Molecular Insights of Genetic Variation in Erianthus arundinaceus Populations Native to China
por: Zhang, Jianbo, et al.
Publicado: (2013)

Characterization of ten novel Ty1/copia-like retrotransposon families of the grapevine genome
por: Moisy, Cédric, et al.
Publicado: (2008)

How genetic variation is affected by geographic environments and ploidy level in Erianthus arundinaceus?
por: Zhang, Jianbo, et al.
Publicado: (2017)

The Landscape of Copia and Gypsy Retrotransposon During Maize Domestication and Improvement
por: Zhang, Xiangbo, et al.
Publicado: (2019)

Ty1-copia group retrotransposons and the evolution of retroelements in several angiosperm plants: evidence of horizontal transmission
por: Woodrow, Pasqualina, et al.
Publicado: (2012)

Cytogenetic and agronomic characterization of intergeneric hybrids between Saccharum spp. hybrid and Erianthus arundinaceus
por: Pachakkil, Babil, et al.
Publicado: (2019)

Ploidy Level and DNA Content of Erianthus arundinaceus as Determined by Flow Cytometry and the Association with Biological Characteristics
por: Yan, Jiajun, et al.
Publicado: (2016)

Complete Chloroplast Genomes of Erianthus arundinaceus and Miscanthus sinensis: Comparative Genomics and Evolution of the Saccharum Complex
por: Tsuruta, Shin-ichi, et al.
Publicado: (2017)

SIRE-1, A putative plant retrovirus is closely related to a legume TY1-copia retrotransposon family
por: Pearce, Stephen R.
Publicado: (2006)

Comparative genetic analysis of the 45S rDNA intergenic spacers from three Saccharum species
por: Huang, Yongji, et al.
Publicado: (2017)

Mutations in retrotransposon AtCOPIA4 compromises resistance to Hyaloperonospora parasitica in Arabidopsis thaliana
por: Wang, Yi-Hong, et al.
Publicado: (2010)

Characterization of chromosome composition of sugarcane in nobilization by using genomic in situ hybridization
por: Yu, Fan, et al.
Publicado: (2018)

Comparative analysis of glyoxalase pathway genes in Erianthus arundinaceus and commercial sugarcane hybrid under salinity and drought conditions
por: Manoj, Vadakkancherry Mohanan, et al.
Publicado: (2019)

DNA Marker Transmission and Linkage Analysis in Populations Derived from a Sugarcane (Saccharum spp.) x Erianthus arundinaceus Hybrid
por: Chen, Jian-wen, et al.
Publicado: (2015)

EARE-1, a Transcriptionally Active Ty1/Copia-Like Retrotransposon Has Colonized the Genome of Excoecaria agallocha through Horizontal Transfer
por: Huang, Jianhua, et al.
Publicado: (2017)

Identification of potential transcriptionally active Copia LTR retrotransposons in Eucalyptus
por: Marcon, Helena, et al.
Publicado: (2011)

Copia and Gypsy retrotransposons activity in sunflower (Helianthus annuus L.)
por: Vukich, Marco, et al.
Publicado: (2009)

Filamentous ascomycete genomes provide insights into Copia retrotransposon diversity in fungi
por: Donnart, Tifenn, et al.
Publicado: (2017)

Genomic abundance and transcriptional activity of diverse gypsy and copia long terminal repeat retrotransposons in three wild sunflower species
por: Qiu, Fan, et al.
Publicado: (2018)

A new method based on SNP of nrDNA-ITS to identify Saccharum spontaneum and its progeny in the genus Saccharum
por: Yang, Shan, et al.
Publicado: (2018)

Comparative de novo transcriptome analysis identifies salinity stress responsive genes and metabolic pathways in sugarcane and its wild relative Erianthus arundinaceus [Retzius] Jeswiet
por: Vignesh, P., et al.
Publicado: (2021)

Biochemical characterization of Ty1 retrotransposon protease
por: Gazda, Lívia Diána, et al.
Publicado: (2020)

Sequence heterogeneity and phylogenetic relationships between the copia retrotransposon in Drosophila species of the repleta and melanogaster groups
por: De Almeida, Luciane M, et al.
Publicado: (2006)

Isolation and Characterization of Erianthus arundinaceus Phosphate Transporter 1 (PHT1) Gene Promoter and 5′ Deletion Analysis of Transcriptional Regulation Regions under Phosphate Stress in Transgenic Tobacco
por: Naveenarani, Murugan, et al.
Publicado: (2023)

In vivo structure of the Ty1 retrotransposon RNA genome
por: Andrzejewska, Angelika, et al.
Publicado: (2021)

Evaluation of the Enzymatic Saccharification Efficiency of an Energy Crop, Erianthus arundinaceus, Pretreated with Ca(OH)(2) Using both Countercurrent Washing System and pH Adjustment by Nonpressurized CO(2)
por: Yamagishi, Kenji, et al.
Publicado: (2021)

LTR-Retrotransposons in R. exoculata and Other Crustaceans: The Outstanding Success of GalEa-Like Copia Elements
por: Piednoël, Mathieu, et al.
Publicado: (2013)

TARE1, a Mutated Copia-Like LTR Retrotransposon Followed by Recent Massive Amplification in Tomato
por: Yin, Hao, et al.
Publicado: (2013)

All nonhomologous chromosomes and rearrangements in Saccharum officinarum × Saccharum spontaneum allopolyploids identified by oligo-based painting
por: Chai, Jin, et al.
Publicado: (2023)

Ty1-copia elements reveal diverse insertion sites linked to polymorphisms among flax (Linum usitatissimum L.) accessions
por: Galindo-González, Leonardo, et al.
Publicado: (2016)

Structure of the Ty3/Gypsy retrotransposon capsid and the evolution of retroviruses
por: Dodonova, Svetlana O., et al.
Publicado: (2019)

cDNA-SRAP and Its Application in Differential Gene Expression Analysis: A Case Study in Erianthus arundinaceum
por: Que, Youxiong, et al.
Publicado: (2012)

Distribution of the copia transposable element in the repleta group of Drosophila
por: Francino, O, et al.
Publicado: (1993)

Determinants of Genomic RNA Encapsidation in the Saccharomyces cerevisiae Long Terminal Repeat Retrotransposons Ty1 and Ty3
por: Pachulska-Wieczorek, Katarzyna, et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_cdih1f28ahnib9tiq94ip9tr5g