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Plant cell wall glycosyltransferases: High-throughput recombinant expression screening and general requirements for these challenging enzymes

Molecular characterization of plant cell wall glycosyltransferases is a critical step towards understanding the biosynthesis of the complex plant cell wall, and ultimately for efficient engineering of biofuel and agricultural crops. The majority of these enzymes have proven very difficult to obtain...

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Autores principales: Welner, Ditte Hededam, Shin, David, Tomaleri, Giovani P., DeGiovanni, Andy M., Tsai, Alex Yi-Lin, Tran, Huu M., Hansen, Sara Fasmer, Green, Derek T., Scheller, Henrik V., Adams, Paul D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5466300/
https://www.ncbi.nlm.nih.gov/pubmed/28598995
http://dx.doi.org/10.1371/journal.pone.0177591
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author Welner, Ditte Hededam
Shin, David
Tomaleri, Giovani P.
DeGiovanni, Andy M.
Tsai, Alex Yi-Lin
Tran, Huu M.
Hansen, Sara Fasmer
Green, Derek T.
Scheller, Henrik V.
Adams, Paul D.
author_facet Welner, Ditte Hededam
Shin, David
Tomaleri, Giovani P.
DeGiovanni, Andy M.
Tsai, Alex Yi-Lin
Tran, Huu M.
Hansen, Sara Fasmer
Green, Derek T.
Scheller, Henrik V.
Adams, Paul D.
author_sort Welner, Ditte Hededam
collection PubMed
description Molecular characterization of plant cell wall glycosyltransferases is a critical step towards understanding the biosynthesis of the complex plant cell wall, and ultimately for efficient engineering of biofuel and agricultural crops. The majority of these enzymes have proven very difficult to obtain in the needed amount and purity for such molecular studies, and recombinant cell wall glycosyltransferase production efforts have largely failed. A daunting number of strategies can be employed to overcome this challenge, including optimization of DNA and protein sequences, choice of expression organism, expression conditions, co-expression partners, purification methods, and optimization of protein solubility and stability. Hence researchers are presented with thousands of potential conditions to test. Ultimately, the subset of conditions that will be sampled depends on practical considerations and prior knowledge of the enzyme(s) being studied. We have developed a rational approach to this process. We devise a pipeline comprising in silico selection of targets and construct design, and high-throughput expression screening, target enrichment, and hit identification. We have applied this pipeline to a test set of Arabidopsis thaliana cell wall glycosyltransferases known to be challenging to obtain in soluble form, as well as to a library of cell wall glycosyltransferases from other plants including agricultural and biofuel crops. The screening results suggest that recombinant cell wall glycosyltransferases in general have a very low soluble:insoluble ratio in lysates from heterologous expression cultures, and that co-expression of chaperones as well as lysis buffer optimization can increase this ratio. We have applied the identified preferred conditions to Reversibly Glycosylated Polypeptide 1 from Arabidopsis thaliana, and processed this enzyme to near-purity in unprecedented milligram amounts. The obtained preparation of Reversibly Glycosylated Polypeptide 1 has the expected arabinopyranose mutase and autoglycosylation activities.
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spelling pubmed-54663002017-06-22 Plant cell wall glycosyltransferases: High-throughput recombinant expression screening and general requirements for these challenging enzymes Welner, Ditte Hededam Shin, David Tomaleri, Giovani P. DeGiovanni, Andy M. Tsai, Alex Yi-Lin Tran, Huu M. Hansen, Sara Fasmer Green, Derek T. Scheller, Henrik V. Adams, Paul D. PLoS One Research Article Molecular characterization of plant cell wall glycosyltransferases is a critical step towards understanding the biosynthesis of the complex plant cell wall, and ultimately for efficient engineering of biofuel and agricultural crops. The majority of these enzymes have proven very difficult to obtain in the needed amount and purity for such molecular studies, and recombinant cell wall glycosyltransferase production efforts have largely failed. A daunting number of strategies can be employed to overcome this challenge, including optimization of DNA and protein sequences, choice of expression organism, expression conditions, co-expression partners, purification methods, and optimization of protein solubility and stability. Hence researchers are presented with thousands of potential conditions to test. Ultimately, the subset of conditions that will be sampled depends on practical considerations and prior knowledge of the enzyme(s) being studied. We have developed a rational approach to this process. We devise a pipeline comprising in silico selection of targets and construct design, and high-throughput expression screening, target enrichment, and hit identification. We have applied this pipeline to a test set of Arabidopsis thaliana cell wall glycosyltransferases known to be challenging to obtain in soluble form, as well as to a library of cell wall glycosyltransferases from other plants including agricultural and biofuel crops. The screening results suggest that recombinant cell wall glycosyltransferases in general have a very low soluble:insoluble ratio in lysates from heterologous expression cultures, and that co-expression of chaperones as well as lysis buffer optimization can increase this ratio. We have applied the identified preferred conditions to Reversibly Glycosylated Polypeptide 1 from Arabidopsis thaliana, and processed this enzyme to near-purity in unprecedented milligram amounts. The obtained preparation of Reversibly Glycosylated Polypeptide 1 has the expected arabinopyranose mutase and autoglycosylation activities. Public Library of Science 2017-06-09 /pmc/articles/PMC5466300/ /pubmed/28598995 http://dx.doi.org/10.1371/journal.pone.0177591 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Welner, Ditte Hededam
Shin, David
Tomaleri, Giovani P.
DeGiovanni, Andy M.
Tsai, Alex Yi-Lin
Tran, Huu M.
Hansen, Sara Fasmer
Green, Derek T.
Scheller, Henrik V.
Adams, Paul D.
Plant cell wall glycosyltransferases: High-throughput recombinant expression screening and general requirements for these challenging enzymes
title Plant cell wall glycosyltransferases: High-throughput recombinant expression screening and general requirements for these challenging enzymes
title_full Plant cell wall glycosyltransferases: High-throughput recombinant expression screening and general requirements for these challenging enzymes
title_fullStr Plant cell wall glycosyltransferases: High-throughput recombinant expression screening and general requirements for these challenging enzymes
title_full_unstemmed Plant cell wall glycosyltransferases: High-throughput recombinant expression screening and general requirements for these challenging enzymes
title_short Plant cell wall glycosyltransferases: High-throughput recombinant expression screening and general requirements for these challenging enzymes
title_sort plant cell wall glycosyltransferases: high-throughput recombinant expression screening and general requirements for these challenging enzymes
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5466300/
https://www.ncbi.nlm.nih.gov/pubmed/28598995
http://dx.doi.org/10.1371/journal.pone.0177591
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