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Sequence variants in ARHGAP15, COLQ and FAM155A associate with diverticular disease and diverticulitis

Diverticular disease is characterized by pouches (that is, diverticulae) due to weakness in the bowel wall, which can become infected and inflamed causing diverticulitis, with potentially severe complications. Here, we test 32.4 million sequence variants identified through whole-genome sequencing (W...

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Autores principales: Sigurdsson, Snaevar, Alexandersson, Kristjan F., Sulem, Patrick, Feenstra, Bjarke, Gudmundsdottir, Steinunn, Halldorsson, Gisli H., Olafsson, Sigurgeir, Sigurdsson, Asgeir, Rafnar, Thorunn, Thorgeirsson, Thorgeir, Sørensen, Erik, Nordholm-Carstensen, Andreas, Burcharth, Jakob, Andersen, Jens, Jørgensen, Henrik Stig, Possfelt-Møller, Emma, Ullum, Henrik, Thorleifsson, Gudmar, Masson, Gisli, Thorsteinsdottir, Unnur, Melbye, Mads, Gudbjartsson, Daniel F., Stefansson, Tryggvi, Jonsdottir, Ingileif, Stefansson, Kari
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5467205/
https://www.ncbi.nlm.nih.gov/pubmed/28585551
http://dx.doi.org/10.1038/ncomms15789
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author Sigurdsson, Snaevar
Alexandersson, Kristjan F.
Sulem, Patrick
Feenstra, Bjarke
Gudmundsdottir, Steinunn
Halldorsson, Gisli H.
Olafsson, Sigurgeir
Sigurdsson, Asgeir
Rafnar, Thorunn
Thorgeirsson, Thorgeir
Sørensen, Erik
Nordholm-Carstensen, Andreas
Burcharth, Jakob
Andersen, Jens
Jørgensen, Henrik Stig
Possfelt-Møller, Emma
Ullum, Henrik
Thorleifsson, Gudmar
Masson, Gisli
Thorsteinsdottir, Unnur
Melbye, Mads
Gudbjartsson, Daniel F.
Stefansson, Tryggvi
Jonsdottir, Ingileif
Stefansson, Kari
author_facet Sigurdsson, Snaevar
Alexandersson, Kristjan F.
Sulem, Patrick
Feenstra, Bjarke
Gudmundsdottir, Steinunn
Halldorsson, Gisli H.
Olafsson, Sigurgeir
Sigurdsson, Asgeir
Rafnar, Thorunn
Thorgeirsson, Thorgeir
Sørensen, Erik
Nordholm-Carstensen, Andreas
Burcharth, Jakob
Andersen, Jens
Jørgensen, Henrik Stig
Possfelt-Møller, Emma
Ullum, Henrik
Thorleifsson, Gudmar
Masson, Gisli
Thorsteinsdottir, Unnur
Melbye, Mads
Gudbjartsson, Daniel F.
Stefansson, Tryggvi
Jonsdottir, Ingileif
Stefansson, Kari
author_sort Sigurdsson, Snaevar
collection PubMed
description Diverticular disease is characterized by pouches (that is, diverticulae) due to weakness in the bowel wall, which can become infected and inflamed causing diverticulitis, with potentially severe complications. Here, we test 32.4 million sequence variants identified through whole-genome sequencing (WGS) of 15,220 Icelanders for association with diverticular disease (5,426 cases) and its more severe form diverticulitis (2,764 cases). Subsequently, 16 sequence variants are followed up in a diverticular disease sample from Denmark (5,970 cases, 3,020 controls). In the combined Icelandic and Danish data sets we observe significant association of intronic variants in ARHGAP15 (Rho GTPase-activating protein 15; rs4662344-T: P=1.9 × 10(−18), odds ratio (OR)=1.23) and COLQ (collagen-like tail subunit of asymmetric acetylcholinesterase; rs7609897-T: P=1.5 × 10(−10), OR=0.87) with diverticular disease and in FAM155A (family with sequence similarity 155A; rs67153654-A: P=3.0 × 10(−11), OR=0.82) with diverticulitis. These are the first loci shown to associate with diverticular disease in a genome-wide study.
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spelling pubmed-54672052017-06-19 Sequence variants in ARHGAP15, COLQ and FAM155A associate with diverticular disease and diverticulitis Sigurdsson, Snaevar Alexandersson, Kristjan F. Sulem, Patrick Feenstra, Bjarke Gudmundsdottir, Steinunn Halldorsson, Gisli H. Olafsson, Sigurgeir Sigurdsson, Asgeir Rafnar, Thorunn Thorgeirsson, Thorgeir Sørensen, Erik Nordholm-Carstensen, Andreas Burcharth, Jakob Andersen, Jens Jørgensen, Henrik Stig Possfelt-Møller, Emma Ullum, Henrik Thorleifsson, Gudmar Masson, Gisli Thorsteinsdottir, Unnur Melbye, Mads Gudbjartsson, Daniel F. Stefansson, Tryggvi Jonsdottir, Ingileif Stefansson, Kari Nat Commun Article Diverticular disease is characterized by pouches (that is, diverticulae) due to weakness in the bowel wall, which can become infected and inflamed causing diverticulitis, with potentially severe complications. Here, we test 32.4 million sequence variants identified through whole-genome sequencing (WGS) of 15,220 Icelanders for association with diverticular disease (5,426 cases) and its more severe form diverticulitis (2,764 cases). Subsequently, 16 sequence variants are followed up in a diverticular disease sample from Denmark (5,970 cases, 3,020 controls). In the combined Icelandic and Danish data sets we observe significant association of intronic variants in ARHGAP15 (Rho GTPase-activating protein 15; rs4662344-T: P=1.9 × 10(−18), odds ratio (OR)=1.23) and COLQ (collagen-like tail subunit of asymmetric acetylcholinesterase; rs7609897-T: P=1.5 × 10(−10), OR=0.87) with diverticular disease and in FAM155A (family with sequence similarity 155A; rs67153654-A: P=3.0 × 10(−11), OR=0.82) with diverticulitis. These are the first loci shown to associate with diverticular disease in a genome-wide study. Nature Publishing Group 2017-06-06 /pmc/articles/PMC5467205/ /pubmed/28585551 http://dx.doi.org/10.1038/ncomms15789 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Sigurdsson, Snaevar
Alexandersson, Kristjan F.
Sulem, Patrick
Feenstra, Bjarke
Gudmundsdottir, Steinunn
Halldorsson, Gisli H.
Olafsson, Sigurgeir
Sigurdsson, Asgeir
Rafnar, Thorunn
Thorgeirsson, Thorgeir
Sørensen, Erik
Nordholm-Carstensen, Andreas
Burcharth, Jakob
Andersen, Jens
Jørgensen, Henrik Stig
Possfelt-Møller, Emma
Ullum, Henrik
Thorleifsson, Gudmar
Masson, Gisli
Thorsteinsdottir, Unnur
Melbye, Mads
Gudbjartsson, Daniel F.
Stefansson, Tryggvi
Jonsdottir, Ingileif
Stefansson, Kari
Sequence variants in ARHGAP15, COLQ and FAM155A associate with diverticular disease and diverticulitis
title Sequence variants in ARHGAP15, COLQ and FAM155A associate with diverticular disease and diverticulitis
title_full Sequence variants in ARHGAP15, COLQ and FAM155A associate with diverticular disease and diverticulitis
title_fullStr Sequence variants in ARHGAP15, COLQ and FAM155A associate with diverticular disease and diverticulitis
title_full_unstemmed Sequence variants in ARHGAP15, COLQ and FAM155A associate with diverticular disease and diverticulitis
title_short Sequence variants in ARHGAP15, COLQ and FAM155A associate with diverticular disease and diverticulitis
title_sort sequence variants in arhgap15, colq and fam155a associate with diverticular disease and diverticulitis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5467205/
https://www.ncbi.nlm.nih.gov/pubmed/28585551
http://dx.doi.org/10.1038/ncomms15789
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