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Coarse-Grained Descriptions of Dynamics for Networks with Both Intrinsic and Structural Heterogeneities
Finding accurate reduced descriptions for large, complex, dynamically evolving networks is a crucial enabler to their simulation, analysis, and ultimately design. Here, we propose and illustrate a systematic and powerful approach to obtaining good collective coarse-grained observables—variables succ...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5467358/ https://www.ncbi.nlm.nih.gov/pubmed/28659781 http://dx.doi.org/10.3389/fncom.2017.00043 |
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author | Bertalan, Tom Wu, Yan Laing, Carlo Gear, C. William Kevrekidis, Ioannis G. |
author_facet | Bertalan, Tom Wu, Yan Laing, Carlo Gear, C. William Kevrekidis, Ioannis G. |
author_sort | Bertalan, Tom |
collection | PubMed |
description | Finding accurate reduced descriptions for large, complex, dynamically evolving networks is a crucial enabler to their simulation, analysis, and ultimately design. Here, we propose and illustrate a systematic and powerful approach to obtaining good collective coarse-grained observables—variables successfully summarizing the detailed state of such networks. Finding such variables can naturally lead to successful reduced dynamic models for the networks. The main premise enabling our approach is the assumption that the behavior of a node in the network depends (after a short initial transient) on the node identity: a set of descriptors that quantify the node properties, whether intrinsic (e.g., parameters in the node evolution equations) or structural (imparted to the node by its connectivity in the particular network structure). The approach creates a natural link with modeling and “computational enabling technology” developed in the context of Uncertainty Quantification. In our case, however, we will not focus on ensembles of different realizations of a problem, each with parameters randomly selected from a distribution. We will instead study many coupled heterogeneous units, each characterized by randomly assigned (heterogeneous) parameter value(s). One could then coin the term Heterogeneity Quantification for this approach, which we illustrate through a model dynamic network consisting of coupled oscillators with one intrinsic heterogeneity (oscillator individual frequency) and one structural heterogeneity (oscillator degree in the undirected network). The computational implementation of the approach, its shortcomings and possible extensions are also discussed. |
format | Online Article Text |
id | pubmed-5467358 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-54673582017-06-28 Coarse-Grained Descriptions of Dynamics for Networks with Both Intrinsic and Structural Heterogeneities Bertalan, Tom Wu, Yan Laing, Carlo Gear, C. William Kevrekidis, Ioannis G. Front Comput Neurosci Neuroscience Finding accurate reduced descriptions for large, complex, dynamically evolving networks is a crucial enabler to their simulation, analysis, and ultimately design. Here, we propose and illustrate a systematic and powerful approach to obtaining good collective coarse-grained observables—variables successfully summarizing the detailed state of such networks. Finding such variables can naturally lead to successful reduced dynamic models for the networks. The main premise enabling our approach is the assumption that the behavior of a node in the network depends (after a short initial transient) on the node identity: a set of descriptors that quantify the node properties, whether intrinsic (e.g., parameters in the node evolution equations) or structural (imparted to the node by its connectivity in the particular network structure). The approach creates a natural link with modeling and “computational enabling technology” developed in the context of Uncertainty Quantification. In our case, however, we will not focus on ensembles of different realizations of a problem, each with parameters randomly selected from a distribution. We will instead study many coupled heterogeneous units, each characterized by randomly assigned (heterogeneous) parameter value(s). One could then coin the term Heterogeneity Quantification for this approach, which we illustrate through a model dynamic network consisting of coupled oscillators with one intrinsic heterogeneity (oscillator individual frequency) and one structural heterogeneity (oscillator degree in the undirected network). The computational implementation of the approach, its shortcomings and possible extensions are also discussed. Frontiers Media S.A. 2017-06-12 /pmc/articles/PMC5467358/ /pubmed/28659781 http://dx.doi.org/10.3389/fncom.2017.00043 Text en Copyright © 2017 Bertalan, Wu, Laing, Gear and Kevrekidis. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Bertalan, Tom Wu, Yan Laing, Carlo Gear, C. William Kevrekidis, Ioannis G. Coarse-Grained Descriptions of Dynamics for Networks with Both Intrinsic and Structural Heterogeneities |
title | Coarse-Grained Descriptions of Dynamics for Networks with Both Intrinsic and Structural Heterogeneities |
title_full | Coarse-Grained Descriptions of Dynamics for Networks with Both Intrinsic and Structural Heterogeneities |
title_fullStr | Coarse-Grained Descriptions of Dynamics for Networks with Both Intrinsic and Structural Heterogeneities |
title_full_unstemmed | Coarse-Grained Descriptions of Dynamics for Networks with Both Intrinsic and Structural Heterogeneities |
title_short | Coarse-Grained Descriptions of Dynamics for Networks with Both Intrinsic and Structural Heterogeneities |
title_sort | coarse-grained descriptions of dynamics for networks with both intrinsic and structural heterogeneities |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5467358/ https://www.ncbi.nlm.nih.gov/pubmed/28659781 http://dx.doi.org/10.3389/fncom.2017.00043 |
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