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BioM2MetDisease: a manually curated database for associations between microRNAs, metabolites, small molecules and metabolic diseases
BioM2MetDisease is a manually curated database that aims to provide a comprehensive and experimentally supported resource of associations between metabolic diseases and various biomolecules. Recently, metabolic diseases such as diabetes have become one of the leading threats to people’s health. Meta...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5467570/ https://www.ncbi.nlm.nih.gov/pubmed/28605773 http://dx.doi.org/10.1093/database/bax037 |
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author | Xu, Yanjun Yang, Haixiu Wu, Tan Dong, Qun Sun, Zeguo Shang, Desi Li, Feng Xu, Yingqi Su, Fei Liu, Siyao Zhang, Yunpeng Li, Xia |
author_facet | Xu, Yanjun Yang, Haixiu Wu, Tan Dong, Qun Sun, Zeguo Shang, Desi Li, Feng Xu, Yingqi Su, Fei Liu, Siyao Zhang, Yunpeng Li, Xia |
author_sort | Xu, Yanjun |
collection | PubMed |
description | BioM2MetDisease is a manually curated database that aims to provide a comprehensive and experimentally supported resource of associations between metabolic diseases and various biomolecules. Recently, metabolic diseases such as diabetes have become one of the leading threats to people’s health. Metabolic disease associated with alterations of multiple types of biomolecules such as miRNAs and metabolites. An integrated and high-quality data source that collection of metabolic disease associated biomolecules is essential for exploring the underlying molecular mechanisms and discovering novel therapeutics. Here, we developed the BioM2MetDisease database, which currently documents 2681 entries of relationships between 1147 biomolecules (miRNAs, metabolites and small molecules/drugs) and 78 metabolic diseases across 14 species. Each entry includes biomolecule category, species, biomolecule name, disease name, dysregulation pattern, experimental technique, a brief description of metabolic disease-biomolecule relationships, the reference, additional annotation information etc. BioM2MetDisease provides a user-friendly interface to explore and retrieve all data conveniently. A submission page was also offered for researchers to submit new associations between biomolecules and metabolic diseases. BioM2MetDisease provides a comprehensive resource for studying biology molecules act in metabolic diseases, and it is helpful for understanding the molecular mechanisms and developing novel therapeutics for metabolic diseases. Database URL: http://www.bio-bigdata.com/BioM2MetDisease/ |
format | Online Article Text |
id | pubmed-5467570 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-54675702017-06-19 BioM2MetDisease: a manually curated database for associations between microRNAs, metabolites, small molecules and metabolic diseases Xu, Yanjun Yang, Haixiu Wu, Tan Dong, Qun Sun, Zeguo Shang, Desi Li, Feng Xu, Yingqi Su, Fei Liu, Siyao Zhang, Yunpeng Li, Xia Database (Oxford) Original Article BioM2MetDisease is a manually curated database that aims to provide a comprehensive and experimentally supported resource of associations between metabolic diseases and various biomolecules. Recently, metabolic diseases such as diabetes have become one of the leading threats to people’s health. Metabolic disease associated with alterations of multiple types of biomolecules such as miRNAs and metabolites. An integrated and high-quality data source that collection of metabolic disease associated biomolecules is essential for exploring the underlying molecular mechanisms and discovering novel therapeutics. Here, we developed the BioM2MetDisease database, which currently documents 2681 entries of relationships between 1147 biomolecules (miRNAs, metabolites and small molecules/drugs) and 78 metabolic diseases across 14 species. Each entry includes biomolecule category, species, biomolecule name, disease name, dysregulation pattern, experimental technique, a brief description of metabolic disease-biomolecule relationships, the reference, additional annotation information etc. BioM2MetDisease provides a user-friendly interface to explore and retrieve all data conveniently. A submission page was also offered for researchers to submit new associations between biomolecules and metabolic diseases. BioM2MetDisease provides a comprehensive resource for studying biology molecules act in metabolic diseases, and it is helpful for understanding the molecular mechanisms and developing novel therapeutics for metabolic diseases. Database URL: http://www.bio-bigdata.com/BioM2MetDisease/ Oxford University Press 2017-05-12 /pmc/articles/PMC5467570/ /pubmed/28605773 http://dx.doi.org/10.1093/database/bax037 Text en © The Author(s) 2017. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Xu, Yanjun Yang, Haixiu Wu, Tan Dong, Qun Sun, Zeguo Shang, Desi Li, Feng Xu, Yingqi Su, Fei Liu, Siyao Zhang, Yunpeng Li, Xia BioM2MetDisease: a manually curated database for associations between microRNAs, metabolites, small molecules and metabolic diseases |
title | BioM2MetDisease: a manually curated database for associations between microRNAs, metabolites, small molecules and metabolic diseases |
title_full | BioM2MetDisease: a manually curated database for associations between microRNAs, metabolites, small molecules and metabolic diseases |
title_fullStr | BioM2MetDisease: a manually curated database for associations between microRNAs, metabolites, small molecules and metabolic diseases |
title_full_unstemmed | BioM2MetDisease: a manually curated database for associations between microRNAs, metabolites, small molecules and metabolic diseases |
title_short | BioM2MetDisease: a manually curated database for associations between microRNAs, metabolites, small molecules and metabolic diseases |
title_sort | biom2metdisease: a manually curated database for associations between micrornas, metabolites, small molecules and metabolic diseases |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5467570/ https://www.ncbi.nlm.nih.gov/pubmed/28605773 http://dx.doi.org/10.1093/database/bax037 |
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