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Finding Solvable Units of Variables in Nonlinear ODEs of ECM Degradation Pathway Network
We consider ordinary differential equation (ODE) model for a pathway network that arises in extracellular matrix (ECM) degradation. For solving the ODEs, we propose applying the mass conservation law (MCL), together with a stoichiometry called doubling rule, to them. Then it leads to extracting new...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5468780/ https://www.ncbi.nlm.nih.gov/pubmed/28638440 http://dx.doi.org/10.1155/2017/5924270 |
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author | Kawasaki, Shuji Minerva, Dhisa Itano, Keiko Suzuki, Takashi |
author_facet | Kawasaki, Shuji Minerva, Dhisa Itano, Keiko Suzuki, Takashi |
author_sort | Kawasaki, Shuji |
collection | PubMed |
description | We consider ordinary differential equation (ODE) model for a pathway network that arises in extracellular matrix (ECM) degradation. For solving the ODEs, we propose applying the mass conservation law (MCL), together with a stoichiometry called doubling rule, to them. Then it leads to extracting new units of variables in the ODEs that can be solved explicitly, at least in principle. The simulation results for the ODE solutions show that the numerical solutions are indeed in good accord with theoretical solutions and satisfy the MALs. |
format | Online Article Text |
id | pubmed-5468780 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-54687802017-06-21 Finding Solvable Units of Variables in Nonlinear ODEs of ECM Degradation Pathway Network Kawasaki, Shuji Minerva, Dhisa Itano, Keiko Suzuki, Takashi Comput Math Methods Med Research Article We consider ordinary differential equation (ODE) model for a pathway network that arises in extracellular matrix (ECM) degradation. For solving the ODEs, we propose applying the mass conservation law (MCL), together with a stoichiometry called doubling rule, to them. Then it leads to extracting new units of variables in the ODEs that can be solved explicitly, at least in principle. The simulation results for the ODE solutions show that the numerical solutions are indeed in good accord with theoretical solutions and satisfy the MALs. Hindawi 2017 2017-05-30 /pmc/articles/PMC5468780/ /pubmed/28638440 http://dx.doi.org/10.1155/2017/5924270 Text en Copyright © 2017 Shuji Kawasaki et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Kawasaki, Shuji Minerva, Dhisa Itano, Keiko Suzuki, Takashi Finding Solvable Units of Variables in Nonlinear ODEs of ECM Degradation Pathway Network |
title | Finding Solvable Units of Variables in Nonlinear ODEs of ECM Degradation Pathway Network |
title_full | Finding Solvable Units of Variables in Nonlinear ODEs of ECM Degradation Pathway Network |
title_fullStr | Finding Solvable Units of Variables in Nonlinear ODEs of ECM Degradation Pathway Network |
title_full_unstemmed | Finding Solvable Units of Variables in Nonlinear ODEs of ECM Degradation Pathway Network |
title_short | Finding Solvable Units of Variables in Nonlinear ODEs of ECM Degradation Pathway Network |
title_sort | finding solvable units of variables in nonlinear odes of ecm degradation pathway network |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5468780/ https://www.ncbi.nlm.nih.gov/pubmed/28638440 http://dx.doi.org/10.1155/2017/5924270 |
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