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Finding Solvable Units of Variables in Nonlinear ODEs of ECM Degradation Pathway Network

We consider ordinary differential equation (ODE) model for a pathway network that arises in extracellular matrix (ECM) degradation. For solving the ODEs, we propose applying the mass conservation law (MCL), together with a stoichiometry called doubling rule, to them. Then it leads to extracting new...

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Detalles Bibliográficos
Autores principales: Kawasaki, Shuji, Minerva, Dhisa, Itano, Keiko, Suzuki, Takashi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5468780/
https://www.ncbi.nlm.nih.gov/pubmed/28638440
http://dx.doi.org/10.1155/2017/5924270
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author Kawasaki, Shuji
Minerva, Dhisa
Itano, Keiko
Suzuki, Takashi
author_facet Kawasaki, Shuji
Minerva, Dhisa
Itano, Keiko
Suzuki, Takashi
author_sort Kawasaki, Shuji
collection PubMed
description We consider ordinary differential equation (ODE) model for a pathway network that arises in extracellular matrix (ECM) degradation. For solving the ODEs, we propose applying the mass conservation law (MCL), together with a stoichiometry called doubling rule, to them. Then it leads to extracting new units of variables in the ODEs that can be solved explicitly, at least in principle. The simulation results for the ODE solutions show that the numerical solutions are indeed in good accord with theoretical solutions and satisfy the MALs.
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spelling pubmed-54687802017-06-21 Finding Solvable Units of Variables in Nonlinear ODEs of ECM Degradation Pathway Network Kawasaki, Shuji Minerva, Dhisa Itano, Keiko Suzuki, Takashi Comput Math Methods Med Research Article We consider ordinary differential equation (ODE) model for a pathway network that arises in extracellular matrix (ECM) degradation. For solving the ODEs, we propose applying the mass conservation law (MCL), together with a stoichiometry called doubling rule, to them. Then it leads to extracting new units of variables in the ODEs that can be solved explicitly, at least in principle. The simulation results for the ODE solutions show that the numerical solutions are indeed in good accord with theoretical solutions and satisfy the MALs. Hindawi 2017 2017-05-30 /pmc/articles/PMC5468780/ /pubmed/28638440 http://dx.doi.org/10.1155/2017/5924270 Text en Copyright © 2017 Shuji Kawasaki et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Kawasaki, Shuji
Minerva, Dhisa
Itano, Keiko
Suzuki, Takashi
Finding Solvable Units of Variables in Nonlinear ODEs of ECM Degradation Pathway Network
title Finding Solvable Units of Variables in Nonlinear ODEs of ECM Degradation Pathway Network
title_full Finding Solvable Units of Variables in Nonlinear ODEs of ECM Degradation Pathway Network
title_fullStr Finding Solvable Units of Variables in Nonlinear ODEs of ECM Degradation Pathway Network
title_full_unstemmed Finding Solvable Units of Variables in Nonlinear ODEs of ECM Degradation Pathway Network
title_short Finding Solvable Units of Variables in Nonlinear ODEs of ECM Degradation Pathway Network
title_sort finding solvable units of variables in nonlinear odes of ecm degradation pathway network
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5468780/
https://www.ncbi.nlm.nih.gov/pubmed/28638440
http://dx.doi.org/10.1155/2017/5924270
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