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Chemistry with semi-classical electrons: reaction trajectories auto-generated by sub-atomistic force fields
For a century now, “Lewis dots” have been a mainstay of chemical thinking, teaching and communication. However, chemists have assumed that this semi-classical picture of electrons needs to be abandoned for quantitative work, and the recourse in computational simulations has been to the extremes of f...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Royal Society of Chemistry
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5468998/ https://www.ncbi.nlm.nih.gov/pubmed/28626563 http://dx.doi.org/10.1039/c7sc01181d |
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author | Bai, Chen Kale, Seyit Herzfeld, Judith |
author_facet | Bai, Chen Kale, Seyit Herzfeld, Judith |
author_sort | Bai, Chen |
collection | PubMed |
description | For a century now, “Lewis dots” have been a mainstay of chemical thinking, teaching and communication. However, chemists have assumed that this semi-classical picture of electrons needs to be abandoned for quantitative work, and the recourse in computational simulations has been to the extremes of first principles treatments of electrons on the one hand and force fields that avoid explicit electrons on the other hand. Given both the successes and limitations of these highly divergent approaches, it seems worth considering whether the Lewis dot picture might be made quantitative after all. Here we review progress to that end, including variations that have been implemented and examples of applications, specifically the acid–base behavior of water, several organic reactions, and electron dynamics in silicon fracture. In each case, the semi-classical approach is highly efficient and generates reasonable and readily interpreted reaction trajectories in turnkey fashion (i.e., without any input about products). Avenues for further progress are also discussed. |
format | Online Article Text |
id | pubmed-5468998 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-54689982017-06-16 Chemistry with semi-classical electrons: reaction trajectories auto-generated by sub-atomistic force fields Bai, Chen Kale, Seyit Herzfeld, Judith Chem Sci Chemistry For a century now, “Lewis dots” have been a mainstay of chemical thinking, teaching and communication. However, chemists have assumed that this semi-classical picture of electrons needs to be abandoned for quantitative work, and the recourse in computational simulations has been to the extremes of first principles treatments of electrons on the one hand and force fields that avoid explicit electrons on the other hand. Given both the successes and limitations of these highly divergent approaches, it seems worth considering whether the Lewis dot picture might be made quantitative after all. Here we review progress to that end, including variations that have been implemented and examples of applications, specifically the acid–base behavior of water, several organic reactions, and electron dynamics in silicon fracture. In each case, the semi-classical approach is highly efficient and generates reasonable and readily interpreted reaction trajectories in turnkey fashion (i.e., without any input about products). Avenues for further progress are also discussed. Royal Society of Chemistry 2017-06-01 2017-04-19 /pmc/articles/PMC5468998/ /pubmed/28626563 http://dx.doi.org/10.1039/c7sc01181d Text en This journal is © The Royal Society of Chemistry 2017 http://creativecommons.org/licenses/by-nc/3.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial 3.0 Unported License (http://creativecommons.org/licenses/by-nc/3.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Chemistry Bai, Chen Kale, Seyit Herzfeld, Judith Chemistry with semi-classical electrons: reaction trajectories auto-generated by sub-atomistic force fields |
title | Chemistry with semi-classical electrons: reaction trajectories auto-generated by sub-atomistic force fields |
title_full | Chemistry with semi-classical electrons: reaction trajectories auto-generated by sub-atomistic force fields |
title_fullStr | Chemistry with semi-classical electrons: reaction trajectories auto-generated by sub-atomistic force fields |
title_full_unstemmed | Chemistry with semi-classical electrons: reaction trajectories auto-generated by sub-atomistic force fields |
title_short | Chemistry with semi-classical electrons: reaction trajectories auto-generated by sub-atomistic force fields |
title_sort | chemistry with semi-classical electrons: reaction trajectories auto-generated by sub-atomistic force fields |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5468998/ https://www.ncbi.nlm.nih.gov/pubmed/28626563 http://dx.doi.org/10.1039/c7sc01181d |
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