Cargando…
Soil biochar amendment affects the diversity of nosZ transcripts: Implications for N(2)O formation
Microbial nitrogen transformation processes such as denitrification represent major sources of the potent greenhouse gas nitrous oxide (N(2)O). Soil biochar amendment has been shown to significantly decrease N(2)O emissions in various soils. However, the effect of biochar on the structure and functi...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5469825/ https://www.ncbi.nlm.nih.gov/pubmed/28611409 http://dx.doi.org/10.1038/s41598-017-03282-y |
_version_ | 1783243651186425856 |
---|---|
author | Harter, Johannes El-Hadidi, Mohamed Huson, Daniel H. Kappler, Andreas Behrens, Sebastian |
author_facet | Harter, Johannes El-Hadidi, Mohamed Huson, Daniel H. Kappler, Andreas Behrens, Sebastian |
author_sort | Harter, Johannes |
collection | PubMed |
description | Microbial nitrogen transformation processes such as denitrification represent major sources of the potent greenhouse gas nitrous oxide (N(2)O). Soil biochar amendment has been shown to significantly decrease N(2)O emissions in various soils. However, the effect of biochar on the structure and function of microbial communities that actively perform nitrogen redox transformations has not been studied in detail yet. To analyse the community composition of actively denitrifying and N(2)O-reducing microbial communities, we collected RNA samples at different time points from a soil microcosm experiment conducted under denitrifying conditions and performed Illumina amplicon sequencing targeting nirK, typical nosZ and atypical nosZ mRNA transcripts. Within 10 days, biochar significantly increased the diversity of nirK and typical nosZ transcripts and resulted in taxonomic shifts among the typical nosZ-expressing microbial community. Furthermore, biochar addition led to a significant increase in transcript production among microbial species that are specialized on direct N(2)O reduction from the environment. Our results point towards a potential coupling of biochar-induced N(2)O emission reduction and an increase in microbial N(2)O reduction activity among specific groups of typical and atypical N(2)O reducers. However, experiments with other soils and biochars will be required to verify the transferability of these findings to other soil-biochar systems. |
format | Online Article Text |
id | pubmed-5469825 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-54698252017-06-19 Soil biochar amendment affects the diversity of nosZ transcripts: Implications for N(2)O formation Harter, Johannes El-Hadidi, Mohamed Huson, Daniel H. Kappler, Andreas Behrens, Sebastian Sci Rep Article Microbial nitrogen transformation processes such as denitrification represent major sources of the potent greenhouse gas nitrous oxide (N(2)O). Soil biochar amendment has been shown to significantly decrease N(2)O emissions in various soils. However, the effect of biochar on the structure and function of microbial communities that actively perform nitrogen redox transformations has not been studied in detail yet. To analyse the community composition of actively denitrifying and N(2)O-reducing microbial communities, we collected RNA samples at different time points from a soil microcosm experiment conducted under denitrifying conditions and performed Illumina amplicon sequencing targeting nirK, typical nosZ and atypical nosZ mRNA transcripts. Within 10 days, biochar significantly increased the diversity of nirK and typical nosZ transcripts and resulted in taxonomic shifts among the typical nosZ-expressing microbial community. Furthermore, biochar addition led to a significant increase in transcript production among microbial species that are specialized on direct N(2)O reduction from the environment. Our results point towards a potential coupling of biochar-induced N(2)O emission reduction and an increase in microbial N(2)O reduction activity among specific groups of typical and atypical N(2)O reducers. However, experiments with other soils and biochars will be required to verify the transferability of these findings to other soil-biochar systems. Nature Publishing Group UK 2017-06-13 /pmc/articles/PMC5469825/ /pubmed/28611409 http://dx.doi.org/10.1038/s41598-017-03282-y Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Harter, Johannes El-Hadidi, Mohamed Huson, Daniel H. Kappler, Andreas Behrens, Sebastian Soil biochar amendment affects the diversity of nosZ transcripts: Implications for N(2)O formation |
title | Soil biochar amendment affects the diversity of nosZ transcripts: Implications for N(2)O formation |
title_full | Soil biochar amendment affects the diversity of nosZ transcripts: Implications for N(2)O formation |
title_fullStr | Soil biochar amendment affects the diversity of nosZ transcripts: Implications for N(2)O formation |
title_full_unstemmed | Soil biochar amendment affects the diversity of nosZ transcripts: Implications for N(2)O formation |
title_short | Soil biochar amendment affects the diversity of nosZ transcripts: Implications for N(2)O formation |
title_sort | soil biochar amendment affects the diversity of nosz transcripts: implications for n(2)o formation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5469825/ https://www.ncbi.nlm.nih.gov/pubmed/28611409 http://dx.doi.org/10.1038/s41598-017-03282-y |
work_keys_str_mv | AT harterjohannes soilbiocharamendmentaffectsthediversityofnosztranscriptsimplicationsforn2oformation AT elhadidimohamed soilbiocharamendmentaffectsthediversityofnosztranscriptsimplicationsforn2oformation AT husondanielh soilbiocharamendmentaffectsthediversityofnosztranscriptsimplicationsforn2oformation AT kapplerandreas soilbiocharamendmentaffectsthediversityofnosztranscriptsimplicationsforn2oformation AT behrenssebastian soilbiocharamendmentaffectsthediversityofnosztranscriptsimplicationsforn2oformation |