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Data for characterization of SALK_084889, a T-DNA insertion line of Arabidopsis thaliana

In this article we report the identification of T-DNA (transfer DNA) insertion sites within two different gene regions in the genome of an Arabidopsis mutant line, SALK_084889. The T-DNA positions are in the 3′ UTR (untranslated region) of DREB2A (Dehydration-responsive element-binding protein 2A) (...

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Autores principales: Zhou, Mingqi, Paul, Anna-Lisa, Ferl, Robert J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5470433/
https://www.ncbi.nlm.nih.gov/pubmed/28649584
http://dx.doi.org/10.1016/j.dib.2017.05.047
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author Zhou, Mingqi
Paul, Anna-Lisa
Ferl, Robert J.
author_facet Zhou, Mingqi
Paul, Anna-Lisa
Ferl, Robert J.
author_sort Zhou, Mingqi
collection PubMed
description In this article we report the identification of T-DNA (transfer DNA) insertion sites within two different gene regions in the genome of an Arabidopsis mutant line, SALK_084889. The T-DNA positions are in the 3′ UTR (untranslated region) of DREB2A (Dehydration-responsive element-binding protein 2A) (AT5G05410) and promoter of LOX1 (Lipoxygenase 1) (AT1G55020) as determined by DNA-PCR and sanger sequencing. The expression levels of DREB2A and LOX1 were also analyzed using quantitative realtime PCR (qPCR) in SALK_084889 and wild type Arabidopsis (Col, Columbia). Further, the comparison of drought and heat tolerance between Col and SALK_084889 were conducted by stress treatments. The present data indicate that in SALK_084889, the expression of DREB2A is not downregulated under normal growth conditions but can be affected only in roots under drought treatment, while LOX1 is significantly downregulated in both roots and shoots under all tested conditions. These data are original and have not been published elsewhere.
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spelling pubmed-54704332017-06-23 Data for characterization of SALK_084889, a T-DNA insertion line of Arabidopsis thaliana Zhou, Mingqi Paul, Anna-Lisa Ferl, Robert J. Data Brief Data Article In this article we report the identification of T-DNA (transfer DNA) insertion sites within two different gene regions in the genome of an Arabidopsis mutant line, SALK_084889. The T-DNA positions are in the 3′ UTR (untranslated region) of DREB2A (Dehydration-responsive element-binding protein 2A) (AT5G05410) and promoter of LOX1 (Lipoxygenase 1) (AT1G55020) as determined by DNA-PCR and sanger sequencing. The expression levels of DREB2A and LOX1 were also analyzed using quantitative realtime PCR (qPCR) in SALK_084889 and wild type Arabidopsis (Col, Columbia). Further, the comparison of drought and heat tolerance between Col and SALK_084889 were conducted by stress treatments. The present data indicate that in SALK_084889, the expression of DREB2A is not downregulated under normal growth conditions but can be affected only in roots under drought treatment, while LOX1 is significantly downregulated in both roots and shoots under all tested conditions. These data are original and have not been published elsewhere. Elsevier 2017-05-31 /pmc/articles/PMC5470433/ /pubmed/28649584 http://dx.doi.org/10.1016/j.dib.2017.05.047 Text en © 2017 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Zhou, Mingqi
Paul, Anna-Lisa
Ferl, Robert J.
Data for characterization of SALK_084889, a T-DNA insertion line of Arabidopsis thaliana
title Data for characterization of SALK_084889, a T-DNA insertion line of Arabidopsis thaliana
title_full Data for characterization of SALK_084889, a T-DNA insertion line of Arabidopsis thaliana
title_fullStr Data for characterization of SALK_084889, a T-DNA insertion line of Arabidopsis thaliana
title_full_unstemmed Data for characterization of SALK_084889, a T-DNA insertion line of Arabidopsis thaliana
title_short Data for characterization of SALK_084889, a T-DNA insertion line of Arabidopsis thaliana
title_sort data for characterization of salk_084889, a t-dna insertion line of arabidopsis thaliana
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5470433/
https://www.ncbi.nlm.nih.gov/pubmed/28649584
http://dx.doi.org/10.1016/j.dib.2017.05.047
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